RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 ATP13A5Q4VNC0 1218 aa19.19■□□□□ 0.66
SPSB3-204ENST00000563741 HENMT1Q5T8I9 393 aaKnown RBP19.19■□□□□ 0.66
SPSB3-204ENST00000563741 RNF187Q5TA31 235 aaPredicted RBP19.19■□□□□ 0.66
SPSB3-204ENST00000563741 CERS6Q6ZMG9 384 aa19.19■□□□□ 0.66
SPSB3-204ENST00000563741 WDR5BQ86VZ2 330 aa19.19■□□□□ 0.66
SPSB3-204ENST00000563741 RAVER1Q8IY67 606 aaKnown RBP19.19■□□□□ 0.66
SPSB3-204ENST00000563741 GPATCH11Q8N954 259 aa19.19■□□□□ 0.66
SPSB3-204ENST00000563741 ZNF398Q8TD17 642 aa19.19■□□□□ 0.66
SPSB3-204ENST00000563741 HHIPQ96QV1 700 aa19.19■□□□□ 0.66
SPSB3-204ENST00000563741 RAD18Q9NS91 495 aa19.19■□□□□ 0.66
SPSB3-204ENST00000563741 SLC39A10Q9ULF5 831 aa19.19■□□□□ 0.66
SPSB3-204ENST00000563741 COQ6Q9Y2Z9 468 aa19.19■□□□□ 0.66
SPSB3-204ENST00000563741 CCDC163A0A0D9SF12 145 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 POLR3GO15318 223 aaPredicted RBP19.18■□□□□ 0.66
SPSB3-204ENST00000563741 TSPAN6O43657 245 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 GFRA3O60609 400 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 NDUFS3O75489 264 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 RECQL5O94762 991 aaPredicted RBP19.18■□□□□ 0.66
SPSB3-204ENST00000563741 APBB3O95704 486 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 LMNAP02545 664 aaKnown RBP19.18■□□□□ 0.66
SPSB3-204ENST00000563741 GABRG2P18507 467 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 CSRP3P50461 194 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 CREB5Q02930 508 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 SLC18A2Q05940 514 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 CCDC15Q0P6D6 951 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 ZNF549Q6P9A3 640 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 ASCL5Q7RTU5 278 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 CYP2U1Q7Z449 544 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 SERPINA9Q86WD7 417 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 DTX3LQ8TDB6 740 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 CXorf40AQ8TE69 158 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 GANCQ8TET4 914 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 CCDC97Q96F63 343 aaPredicted RBP19.18■□□□□ 0.66
SPSB3-204ENST00000563741 SELENOSQ9BQE4 189 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 RIOK2Q9BVS4 552 aaKnown RBP19.18■□□□□ 0.66
SPSB3-204ENST00000563741 CRLS1Q9UJA2 301 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 VPS9D1Q9Y2B5 631 aa19.18■□□□□ 0.66
SPSB3-204ENST00000563741 PLRG1O43660 514 aaKnown RBP19.17■□□□□ 0.66
SPSB3-204ENST00000563741 TYROBPO43914 113 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 OR1I1O60431 355 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 ACRV1P26436 265 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 CNR2P34972 360 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 GYS2P54840 703 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 PPARDQ03181 441 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 ITGA9Q13797 1035 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 KIAA1324Q6UXG2 1013 aaKnown RBP19.17■□□□□ 0.66
SPSB3-204ENST00000563741 KDM7AQ6ZMT4 941 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 SLC41A1Q8IVJ1 513 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 NRSN1Q8IZ57 195 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 NXPE1Q8N323 547 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 BANPQ8N9N5 519 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 ELMO2Q96JJ3 720 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 SPATA16Q9BXB7 569 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 ABCG8Q9H221 673 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 SSU72Q9NP77 194 aaKnown RBP19.17■□□□□ 0.66
SPSB3-204ENST00000563741 PCMTD2Q9NV79 361 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 SMOXQ9NWM0 555 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 FZD4Q9ULV1 537 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 CORO1CQ9ULV4 474 aaPredicted RBP19.17■□□□□ 0.66
SPSB3-204ENST00000563741 PLXNA2O75051 1894 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 ZFHX2Q9C0A1 2572 aaPredicted RBP19.17■□□□□ 0.66
SPSB3-204ENST00000563741 UBA6A0AVT1 1052 aaPredicted RBP19.17■□□□□ 0.66
SPSB3-204ENST00000563741 TMEM120BA0PK00 339 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 PFDN6O15212 129 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 SPAG7O75391 227 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 TYK2P29597 1187 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 PXNP49023 591 aaPredicted RBP19.17■□□□□ 0.66
SPSB3-204ENST00000563741 DGKEP52429 567 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 PGGT1BP53609 377 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 ADPRHP54922 357 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 ILF2Q12905 390 aaKnown RBP19.17■□□□□ 0.66
SPSB3-204ENST00000563741 MPP2Q14168 576 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 USP10Q14694 798 aaKnown RBP19.17■□□□□ 0.66
SPSB3-204ENST00000563741 ZKSCAN8Q15776 578 aaPredicted RBP19.17■□□□□ 0.66
SPSB3-204ENST00000563741 USP30Q70CQ3 517 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 TRAM1L1Q8N609 369 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 TSTD1Q8NFU3 115 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 ACMSDQ8TDX5 336 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 ALKBH8Q96BT7 664 aaKnown RBP19.17■□□□□ 0.66
SPSB3-204ENST00000563741 AP2M1Q96CW1 435 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 NUS1Q96E22 293 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 BIRC8Q96P09 236 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 ZSCAN5AQ9BUG6 496 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 CD93Q9NPY3 652 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 TMPRSS11EQ9UL52 423 aa19.17■□□□□ 0.66
SPSB3-204ENST00000563741 PRPF4O43172 522 aaKnown RBP eCLIP19.16■□□□□ 0.66
SPSB3-204ENST00000563741 SAT1P21673 171 aa19.16■□□□□ 0.66
SPSB3-204ENST00000563741 PTGER3P43115 390 aa19.16■□□□□ 0.66
SPSB3-204ENST00000563741 POLD2P49005 469 aa19.16■□□□□ 0.66
SPSB3-204ENST00000563741 ATP1A2P50993 1020 aa19.16■□□□□ 0.66
SPSB3-204ENST00000563741 ADARP55265 1226 aaKnown RBP19.16■□□□□ 0.66
SPSB3-204ENST00000563741 TAS2R39P59534 338 aa19.16■□□□□ 0.66
SPSB3-204ENST00000563741 POU4F1Q01851 419 aa19.16■□□□□ 0.66
SPSB3-204ENST00000563741 PDE1CQ14123 709 aaPredicted RBP19.16■□□□□ 0.66
SPSB3-204ENST00000563741 ZNF284Q2VY69 593 aa19.16■□□□□ 0.66
SPSB3-204ENST00000563741 HECTD2Q5U5R9 776 aa19.16■□□□□ 0.66
SPSB3-204ENST00000563741 ZNF765Q7L2R6 523 aa19.16■□□□□ 0.66
SPSB3-204ENST00000563741 CEP97Q8IW35 865 aa19.16■□□□□ 0.66
SPSB3-204ENST00000563741 HMGB4Q8WW32 186 aa19.16■□□□□ 0.66
SPSB3-204ENST00000563741 APOPT1Q96IL0 206 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms