RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 RGSL1A5PLK6 1076 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 NPIPB15A6NHN6 443 aaPredicted RBP18.97■□□□□ 0.63
SMPD3-203ENST00000563226 NCF1BA6NI72 391 aaPredicted RBP18.97■□□□□ 0.63
SMPD3-203ENST00000563226 NCF1CA8MVU1 366 aaPredicted RBP18.97■□□□□ 0.63
SMPD3-203ENST00000563226 GRM6O15303 877 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 CIB2O75838 187 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 ESR1P03372 595 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 NCF1P14598 390 aaPredicted RBP18.97■□□□□ 0.63
SMPD3-203ENST00000563226 MYOGP15173 224 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 BPIP17213 487 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 CLCN7P51798 805 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 INHBCP55103 352 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 ADARP55265 1226 aaKnown RBP18.97■□□□□ 0.63
SMPD3-203ENST00000563226 FOXA1P55317 472 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 SWT1Q5T5J6 900 aaKnown RBP18.97■□□□□ 0.63
SMPD3-203ENST00000563226 SERPINA9Q86WD7 417 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 FBXO39Q8N4B4 442 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 NKAPQ8N5F7 415 aaKnown RBP18.97■□□□□ 0.63
SMPD3-203ENST00000563226 ACTRT2Q8TDY3 377 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 ZBTB26Q9HCK0 441 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 IL26Q9NPH9 171 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 SLCO3A1Q9UIG8 710 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 C15orf41Q9Y2V0 281 aa18.97■□□□□ 0.63
SMPD3-203ENST00000563226 E5RI56 91 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 AIM2O14862 343 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 TRIM24O15164 1050 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 CLASP2O75122 1294 aaKnown RBP18.96■□□□□ 0.63
SMPD3-203ENST00000563226 LMNAP02545 664 aaKnown RBP18.96■□□□□ 0.63
SMPD3-203ENST00000563226 THRAP10827 490 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 SERPINA4P29622 427 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 EEF1DP29692 281 aaKnown RBP18.96■□□□□ 0.63
SMPD3-203ENST00000563226 HK3P52790 923 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 UGT3A2Q3SY77 523 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 RAB44Q7Z6P3 723 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-203ENST00000563226 AFAP1L2Q8N4X5 818 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 GRIN3AQ8TCU5 1115 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 DTX3LQ8TDB6 740 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 TRPC4APQ8TEL6 797 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 MID1IP1Q9NPA3 183 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 CDH22Q9UJ99 828 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 TSR3Q9UJK0 312 aaKnown RBP18.96■□□□□ 0.63
SMPD3-203ENST00000563226 PTGDR2Q9Y5Y4 395 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 SYN1P17600 705 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 UGT1A6P19224 532 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 CD9P21926 228 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 UGT1A1P22309 533 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 UGT1A4P22310 534 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 UGT1A3P35503 534 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 UGT1A5P35504 534 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 AGTR2P50052 363 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 NUDT2P50583 147 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 SNRPD1P62314 119 aaKnown RBP18.96■□□□□ 0.63
SMPD3-203ENST00000563226 ZNF77Q15935 545 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 MYLK3Q32MK0 819 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 TRMT5Q32P41 509 aaKnown RBP18.96■□□□□ 0.63
SMPD3-203ENST00000563226 C1orf146Q5VVC0 180 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 PGM2L1Q6PCE3 622 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 PSRC1Q6PGN9 363 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-203ENST00000563226 CHSY3Q70JA7 882 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 METTL3Q86U44 580 aaKnown RBP18.96■□□□□ 0.63
SMPD3-203ENST00000563226 HMGCLL1Q8TB92 370 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 LKAAEAR1Q8TD35 194 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 RCN3Q96D15 328 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 C3orf30Q96M34 536 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 KCNA7Q96RP8 456 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 ASB8Q9H765 288 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 PRSS21Q9Y6M0 314 aa18.96■□□□□ 0.63
SMPD3-203ENST00000563226 ATP6AP2A0A1C7CYW4 349 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 GOLGA8CPA6NN73 597 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 PRMT5O14744 637 aaPredicted RBP18.95■□□□□ 0.62
SMPD3-203ENST00000563226 SLC22A2O15244 555 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 ATP6AP2O75787 350 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 TYRP14679 529 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 DDX6P26196 483 aaKnown RBP eCLIP18.95■□□□□ 0.62
SMPD3-203ENST00000563226 CCNHP51946 323 aaPredicted RBP18.95■□□□□ 0.62
SMPD3-203ENST00000563226 SESN3P58005 492 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 IL2P60568 153 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 ACTR3P61158 418 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 TBL3Q12788 808 aaKnown RBP18.95■□□□□ 0.62
SMPD3-203ENST00000563226 NFATC2Q13469 925 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 CYLC2Q14093 348 aaPredicted RBP18.95■□□□□ 0.62
SMPD3-203ENST00000563226 ARHGAP15Q53QZ3 475 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 GRASPQ7Z6J2 395 aaPredicted RBP18.95■□□□□ 0.62
SMPD3-203ENST00000563226 STK40Q8N2I9 435 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 CFAP61Q8NHU2 1237 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 RP9Q8TA86 221 aaKnown RBP18.95■□□□□ 0.62
SMPD3-203ENST00000563226 ING5Q8WYH8 240 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 HERVK_113Q902F9 699 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 IRF7Q92985 503 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 WNT6Q9Y6F9 365 aa18.95■□□□□ 0.62
SMPD3-203ENST00000563226 PLXNB3Q9ULL4 1909 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 PER2O15055 1255 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 PABPC1P11940 636 aaKnown RBP18.94■□□□□ 0.62
SMPD3-203ENST00000563226 ITGB6P18564 788 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 PTDSS1P48651 473 aaKnown RBP18.94■□□□□ 0.62
SMPD3-203ENST00000563226 CHRNA6Q15825 494 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 PRSS36Q5K4E3 855 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 LY6G5CQ5SRR4 150 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 CRTC1Q6UUV9 634 aa18.94■□□□□ 0.62
SMPD3-203ENST00000563226 DPY19L3Q6ZPD9 716 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms