RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 NRROSQ86YC3 692 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 NAGSQ8N159 534 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 ZNF808Q8N4W9 903 aaPredicted RBP5.28□□□□□ -1.56
HERC1-213ENST00000561359 PLA2G15Q8NCC3 412 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 OR7D4Q8NG98 312 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 GOLGA5Q8TBA6 731 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 FUBP1Q96AE4 644 aaKnown RBP5.28□□□□□ -1.56
HERC1-213ENST00000561359 C14orf79Q96F83 325 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 HRASLS5Q96KN8 279 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 OR6C1Q96RD1 312 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 RUFY1Q96T51 708 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 SIK2Q9H0K1 926 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 FAM204AQ9H8W3 233 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 ARHGEF38Q9NXL2 777 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 C5AR2Q9P296 337 aa5.28□□□□□ -1.56
HERC1-213ENST00000561359 FLNAP21333 2647 aaKnown RBP5.28□□□□□ -1.56
HERC1-213ENST00000561359 M0QYV0 167 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 O00370 1275 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 E2F3O00716 465 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 TEX33O43247 280 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 SPAG6O75602 509 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 TMEM63AO94886 807 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 POP4O95707 220 aaKnown RBP5.27□□□□□ -1.57
HERC1-213ENST00000561359 ALPPP05187 535 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 CEACAM5P06731 702 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 VDRP11473 427 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 LPOP22079 712 aaPredicted RBP5.27□□□□□ -1.57
HERC1-213ENST00000561359 GNPDA1P46926 289 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 NDST2P52849 883 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 RRADP55042 308 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 PITX1P78337 314 aaPredicted RBP5.27□□□□□ -1.57
HERC1-213ENST00000561359 ELP6Q0PNE2 266 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 AKAP6Q13023 2319 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 IL11RAQ14626 422 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 POLD3Q15054 466 aaPredicted RBP5.27□□□□□ -1.57
HERC1-213ENST00000561359 LLGL1Q15334 1064 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 ANO6Q4KMQ2 910 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 ALFQ53S48 1182 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 CRB2Q5IJ48 1285 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 WIPI1Q5MNZ9 446 aaPredicted RBP5.27□□□□□ -1.57
HERC1-213ENST00000561359 C1orf220Q5T0J3 134 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 FAM199XQ6PEV8 388 aaPredicted RBP5.27□□□□□ -1.57
HERC1-213ENST00000561359 LRFN4Q6PJG9 635 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 GDPD4Q6W3E5 623 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 SETD3Q86TU7 594 aaPredicted RBP5.27□□□□□ -1.57
HERC1-213ENST00000561359 CUZD1Q86UP6 607 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 ZADH2Q8N4Q0 377 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 PDILTQ8N807 584 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 GRHL3Q8TE85 626 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 SLC35F5Q8WV83 523 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 INPP5DQ92835 1189 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 RELTQ969Z4 430 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 EEF2KMTQ96G04 330 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 PLPPR2Q96GM1 343 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 CCDC120Q96HB5 630 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 HSFY1Q96LI6 401 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 CLIC6Q96NY7 704 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 TRAPPC9Q96Q05 1148 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 TRIM62Q9BVG3 475 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 LRRC27Q9C0I9 530 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 BRD8Q9H0E9 1235 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 WDR26Q9H7D7 661 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 ATP13A1Q9HD20 1204 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 SLC39A2Q9NP94 309 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 ST7Q9NRC1 585 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 SEMA3GQ9NS98 782 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 DMAC2Q9NW81 257 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 DDIT4Q9NX09 232 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 SIDT1Q9NXL6 827 aaKnown RBP5.27□□□□□ -1.57
HERC1-213ENST00000561359 AJAP1Q9UKB5 411 aaPredicted RBP5.27□□□□□ -1.57
HERC1-213ENST00000561359 FRMD4BQ9Y2L6 1034 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 ACTL7AQ9Y615 435 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 HS3ST4Q9Y661 456 aa5.27□□□□□ -1.57
HERC1-213ENST00000561359 TRGV8A0A0C4DH27 118 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 THAP12O43422 761 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 IGLV3-25P01717 112 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 OR1E1P30953 314 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 NTF4P34130 210 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 ACTR1BP42025 376 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 SEPHS1P49903 392 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 LIG3P49916 1009 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 ACTR1AP61163 376 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 SNRPD1P62314 119 aaKnown RBP5.26□□□□□ -1.57
HERC1-213ENST00000561359 CDK17Q00537 523 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 PDE1BQ01064 536 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 AMPD3Q01432 767 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 RAD51Q06609 339 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 PPP3CAQ08209 521 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 FOXD4Q12950 439 aaPredicted RBP5.26□□□□□ -1.57
HERC1-213ENST00000561359 NFATC2Q13469 925 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 ASIC2Q16515 512 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 MYLK3Q32MK0 819 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 GLIPR1L2Q4G1C9 344 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 TMEM52BQ4KMG9 183 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 ATXN7L2Q5T6C5 722 aaPredicted RBP5.26□□□□□ -1.57
HERC1-213ENST00000561359 MTFR2Q6P444 385 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 XKRXQ6PP77 449 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 LCLAT1Q6UWP7 414 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 RPTNQ6XPR3 784 aa5.26□□□□□ -1.57
HERC1-213ENST00000561359 MED25Q71SY5 747 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms