RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 TMEM202A6NGA9 273 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 ARHGAP33O14559 1287 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 EIF3HO15372 352 aaKnown RBP eCLIP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 CD3EAPO15446 510 aaKnown RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 LRP3O75074 770 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 USP1O94782 785 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 ASMTLO95671 621 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 TTC4O95801 387 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 GOT2P00505 430 aaKnown RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 FUCA1P04066 466 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 CEACAM5P06731 702 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 SYPP08247 313 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 PGAM1P18669 254 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 PAMP19021 973 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 ITGALP20701 1170 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 CTSKP43235 329 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 POLD2P49005 469 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 NXPH1P58417 271 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 CACNG1Q06432 222 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 TMEM115Q12893 351 aaPredicted RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 CUL1Q13616 776 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 NFATC4Q14934 902 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 FASTKD3Q14CZ7 662 aaKnown RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 SF3A2Q15428 464 aaKnown RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 CSRP2Q16527 193 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 HLA-BQ31612 363 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 FASTKD1Q53R41 847 aaKnown RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 ZNF648Q5T619 568 aaPredicted RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 TCEAL6Q6IPX3 200 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 PSAPL1Q6NUJ1 521 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 ASCL5Q7RTU5 278 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 SNX20Q7Z614 316 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 TRIM74Q86UV6 250 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 PALM2Q8IXS6 379 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 FBXO36Q8NEA4 188 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 PYROXD1Q8WU10 500 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 UBXN4Q92575 508 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 TCEAL3Q969E4 200 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 ZNF669Q96BR6 464 aaPredicted RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 SGSM3Q96HU1 749 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 WDR92Q96MX6 357 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 ERVMER34-1Q9H9K5 563 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 TRIM39Q9HCM9 518 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 SAYSD1Q9NPB0 183 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 RRAGDQ9NQL2 400 aaPredicted RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 MTRF1LQ9UGC7 380 aaKnown RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 ZC3H7BQ9UGR2 993 aaKnown RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 MOSPD1Q9UJG1 213 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 NFU1Q9UMS0 254 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 CHMP2BQ9UQN3 213 aa10.19□□□□□ -0.78
LRRC28-221ENST00000561276 OAS3Q9Y6K5 1087 aaKnown RBP10.19□□□□□ -0.78
LRRC28-221ENST00000561276 SDK1Q7Z5N4 2213 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 TRBV5-4A0A0C4DH59 114 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 GOLGA8KD6RF30 607 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 GOLGA8TH3BQL2 631 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 TNFRSF10CO14798 259 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 MTX2O75431 263 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 PRSS56P0CW18 603 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 ENGP17813 658 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 TGM1P22735 817 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 KELP23276 732 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 ARNTP27540 789 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 ECHS1P30084 290 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 FOXN2P32314 431 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 MAGEA4P43358 317 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 ARCN1P48444 511 aaKnown RBP10.18□□□□□ -0.78
LRRC28-221ENST00000561276 KIAA1024LP59773 190 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 SRP54P61011 504 aaKnown RBP10.18□□□□□ -0.78
LRRC28-221ENST00000561276 GRIK2Q13002 908 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 EIF2B5Q13144 721 aaKnown RBP10.18□□□□□ -0.78
LRRC28-221ENST00000561276 ERCC6LQ2NKX8 1250 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 ZNF542PQ5EBM4 170 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 SPANXN3Q5MJ09 141 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 LDLRAP1Q5SW96 308 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 KIAA0930Q6ICG6 404 aaPredicted RBP10.18□□□□□ -0.78
LRRC28-221ENST00000561276 DOK6Q6PKX4 331 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 AFTPHQ6ULP2 937 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 MACC1Q6ZN28 852 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 UNC5AQ6ZN44 842 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 RD3Q7Z3Z2 195 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 ADGRG6Q86SQ4 1221 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 PHYKPLQ8IUZ5 450 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 PIANPQ8IYJ0 282 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 UNC5BQ8IZJ1 945 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 NXPE1Q8N323 547 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 GPR161Q8N6U8 529 aaKnown RBP10.18□□□□□ -0.78
LRRC28-221ENST00000561276 PNPLA1Q8N8W4 532 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 OR56A4Q8NGH8 313 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 TSACCQ96A04 125 aaPredicted RBP10.18□□□□□ -0.78
LRRC28-221ENST00000561276 CFAP36Q96G28 342 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 TTC25Q96NG3 672 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 WDR83Q9BRX9 315 aaKnown RBP10.18□□□□□ -0.78
LRRC28-221ENST00000561276 GTPBP2Q9BX10 602 aaKnown RBP10.18□□□□□ -0.78
LRRC28-221ENST00000561276 ZDHHC5Q9C0B5 715 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 TSPYL1Q9H0U9 437 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 OR2AG1Q9H205 316 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 GAREM1Q9H706 876 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 CAAP1Q9H8G2 361 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 ANKZF1Q9H8Y5 726 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 MRPL40Q9NQ50 206 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms