RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 GLOD4Q9HC38 313 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 FBXO8Q9NRD0 319 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 ZNF358Q9NW07 568 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 OSER1Q9NX31 292 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 NUDT5Q9UKK9 219 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 SCML2Q9UQR0 700 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 AAR2Q9Y312 384 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 HS3ST4Q9Y661 456 aa13.9□□□□□ -0.18
RABGGTA-220ENST00000560998 DHRS12A0PJE2 317 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 FAM172BPA6NC97 362 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 NOTOA8MTQ0 251 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 MATN3O15232 486 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 TIMM44O43615 452 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 F7P08709 466 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 RAD23AP54725 363 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 CSE1LP55060 971 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 IFITM2Q01629 132 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 NRG1Q02297 640 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 TNK2Q07912 1038 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 BFSP2Q13515 415 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 AASDHQ4L235 1098 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 RBM48Q5RL73 367 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 CYP2R1Q6VVX0 501 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 KIAA0408Q6ZU52 694 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 C14orf80Q86SX3 495 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 HEATR4Q86WZ0 1026 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 PLD6Q8N2A8 252 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 SPATA22Q8NHS9 363 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 ATXN7L3BQ96GX2 97 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 FBXL20Q96IG2 436 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 TSNARE1Q96NA8 513 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 TBL1YQ9BQ87 522 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 ACE2Q9BYF1 805 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 MUC3BQ9H195 1237 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 MRM3Q9HC36 420 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 NDFIP2Q9NV92 336 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 ISPDA4D126 451 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 C16orf96A6NNT2 1141 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 TBKBP1A7MCY6 615 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 E9PAM4 449 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 ANXA9O76027 345 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 GPIP06744 558 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 HOXD11P31277 338 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 OR1G1P47890 313 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 SERPINB10P48595 397 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 ADARB1P78563 741 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 RALGDSQ12967 914 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 INAVAQ3KP66 663 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 CYBRD1Q53TN4 286 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 FAM209AQ5JX71 171 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 ATAD3BQ5T9A4 648 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 SDHAF4Q5VUM1 108 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 MSANTD2Q6P1R3 559 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 MON1AQ86VX9 555 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 RTL3Q8N8U3 475 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 HHIPL1Q96JK4 782 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 C8orf48Q96LL4 319 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 SERPINB11Q96P15 392 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 SH3GL1Q99961 368 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 CEP44Q9C0F1 390 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 MUC13Q9H3R2 512 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 SCUBE2Q9NQ36 999 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 IARS2Q9NSE4 1012 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 TBC1D13Q9NVG8 400 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 ZDHHC2Q9UIJ5 367 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 PRG3Q9Y2Y8 225 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 ST14Q9Y5Y6 855 aa13.89□□□□□ -0.19
RABGGTA-220ENST00000560998 E2F8A0AVK6 867 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 BBIP1A8MTZ0 92 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 MRASO14807 208 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 NPHS1O60500 1241 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 MOCS2O96007 188 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 MT-CYBP00156 380 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 SNRPB2P08579 225 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 ATP6V1B2P21281 511 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 CA8P35219 290 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 ABCG1P45844 678 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 RPS9P46781 194 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 ARCN1P48444 511 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 GPR15P49685 360 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 MLLT6P55198 1093 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 SP3Q02447 781 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 SLC12A1Q13621 1099 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 NFE2Q16621 373 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 DDR2Q16832 855 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 XAF1Q6GPH4 301 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 LCN8Q6JVE9 175 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 PRR23CQ6ZRP0 262 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 DCP2Q8IU60 420 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 ARMC8Q8IUR7 673 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 AFAP1L2Q8N4X5 818 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 FUBP3Q96I24 572 aaKnown RBP eCLIP13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 PPP1R36Q96LQ0 422 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 ATP13A3Q9H7F0 1226 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 INTS10Q9NVR2 710 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 MTRRQ9UBK8 725 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 ENPP5Q9UJA9 477 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 TLR6Q9Y2C9 796 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 MRPL42Q9Y6G3 142 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms