RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SPINT3P49223 89 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 IDH3AP50213 366 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 RPL14P50914 215 aaKnown RBP12.8□□□□□ -0.36
SNX1-211ENST00000560829 CLCN7P51798 805 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 MESP2Q0VG99 397 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 ADAM15Q13444 863 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 OR4D1Q15615 310 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 ZNF805Q5CZA5 627 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 ARSIQ5FYB1 569 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 EPGNQ6UW88 154 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 NXPE1Q8N323 547 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 GIMAP7Q8NHV1 300 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 STAG3L4Q8TBR4 150 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 PBXIP1Q96AQ6 731 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 PDLIM5Q96HC4 596 aaKnown RBP12.8□□□□□ -0.36
SNX1-211ENST00000560829 SLC30A3Q99726 388 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 TRMOQ9BU70 441 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 CLPBQ9H078 707 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 NFKBIL1Q9UBC1 381 aaPredicted RBP12.8□□□□□ -0.36
SNX1-211ENST00000560829 CRLS1Q9UJA2 301 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 PLA2G4CQ9UP65 541 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 APOBEC2Q9Y235 224 aaKnown RBP12.8□□□□□ -0.36
SNX1-211ENST00000560829 DHRS7Q9Y394 339 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 CAPN7Q9Y6W3 813 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 A8MX80 341 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 SMIM24O75264 130 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 MTHFD2P13995 350 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 TIMP2P16035 220 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 MPSTP25325 297 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 RUNX3Q13761 415 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 ATAT1Q5SQI0 421 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 MACC1Q6ZN28 852 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 CPA6Q8N4T0 437 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 TERB1Q8NA31 727 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 SIDT2Q8NBJ9 832 aaKnown RBP12.8□□□□□ -0.36
SNX1-211ENST00000560829 PPM1EQ8WY54 764 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 FAM136AQ96C01 138 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 MOCOSQ96EN8 888 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 S1PR5Q9H228 398 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 CLEC1BQ9P126 229 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 VTI1BQ9UEU0 232 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 GNPTGQ9UJJ9 305 aa12.8□□□□□ -0.36
SNX1-211ENST00000560829 ANKRD36A6QL64 1941 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 E5RI56 91 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 HDAC3O15379 428 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 UGT1A6P19224 532 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 CHRM3P20309 590 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 UGT1A1P22309 533 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 UGT1A4P22310 534 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 UGT1A3P35503 534 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 UGT1A5P35504 534 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 OPRD1P41143 372 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 EIF2DP41214 584 aaKnown RBP12.79□□□□□ -0.36
SNX1-211ENST00000560829 CCR10P46092 362 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 DCDC1P59894 354 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 IL2P60568 153 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 ARHGEF7Q14155 803 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 TBCCQ15814 346 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 HNRNPA1L2Q32P51 320 aaKnown RBP12.79□□□□□ -0.36
SNX1-211ENST00000560829 CFAP157Q5JU67 520 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 ZNF678Q5SXM1 525 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 FRMD7Q6ZUT3 714 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 TTC7BQ86TV6 843 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 KIRREL3Q8IZU9 778 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 CCNYL1Q8N7R7 359 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 INPP5DQ92835 1189 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 ULK4Q96C45 1275 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 KLHL29Q96CT2 875 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 RILPQ96NA2 401 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 MYADMQ96S97 322 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 BOCQ9BWV1 1114 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 MTG2Q9H4K7 406 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 GSTO2Q9H4Y5 243 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 COG4Q9H9E3 785 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 EML4Q9HC35 981 aaKnown RBP12.79□□□□□ -0.36
SNX1-211ENST00000560829 ARHGEF3Q9NR81 526 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 ZDHHC3Q9NYG2 299 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 PKD2L2Q9NZM6 624 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 ZDHHC2Q9UIJ5 367 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 LNPEPQ9UIQ6 1025 aa12.79□□□□□ -0.36
SNX1-211ENST00000560829 IGLV3-16A0A075B6K0 115 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 EDDM13A0A1B0GTR0 161 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 RGSL1A5PLK6 1076 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 CCDC85CA6NKD9 419 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 SYCE1LA8MT33 242 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 CAPN14A8MX76 684 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 GRID2O43424 1007 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 KLK8O60259 260 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 TARSP26639 723 aaKnown RBP12.78□□□□□ -0.36
SNX1-211ENST00000560829 NSG1P42857 185 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 HERVK_113P63132 956 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 SEMG2Q02383 582 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 METTL21CQ5VZV1 264 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 SEL1L3Q68CR1 1132 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 PTRHD1Q6GMV3 140 aaKnown RBP12.78□□□□□ -0.36
SNX1-211ENST00000560829 DPPA4Q7L190 304 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 RAVER1Q8IY67 606 aaKnown RBP12.78□□□□□ -0.36
SNX1-211ENST00000560829 TDHQ8IZJ6 230 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 MICALL1Q8N3F8 863 aa12.78□□□□□ -0.36
SNX1-211ENST00000560829 TMIEQ8NEW7 156 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms