RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 HDCP19113 662 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 DPP6P42658 865 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 ATP4BP51164 291 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 CEACAM7Q14002 265 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 PTPRRQ15256 657 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 LRIT3Q3SXY7 679 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 FAM217AQ8IXS0 508 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 WFDC5Q8TCV5 224 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 ALG14Q96F25 216 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 ECSITQ9BQ95 431 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 MRPL17Q9NRX2 175 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 DNMT3BQ9UBC3 853 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 ADAMTS6Q9UKP5 1117 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 IKZF3Q9UKT9 509 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 MAFFQ9ULX9 164 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 PCDHB9Q9Y5E1 797 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 DNAJC15Q9Y5T4 150 aa14.37□□□□□ -0.11
RABGGTA-212ENST00000559974 DOCK6Q96HP0 2047 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 LRRC14BA6NHZ5 514 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 H3BNX3 289 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 AZIN1O14977 448 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 OR1I1O60431 355 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 CLASP2O75122 1294 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 ECI2O75521 394 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 XRCC1P18887 633 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 ME2P23368 584 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 EEF1DP29692 281 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 CLCN4P51793 760 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 PKNOX1P55347 436 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 MRPS35P82673 323 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 CDC16Q13042 620 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 FLOT2Q14254 428 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 TSNQ15631 228 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 GEN1Q17RS7 908 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 EML3Q32P44 896 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 AGKQ53H12 422 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 CTSL3PQ5NE16 218 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 ATXN7L2Q5T6C5 722 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 PRPF38BQ5VTL8 546 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 FAM219BQ5XKK7 198 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 KANK2Q63ZY3 851 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 RBM23Q86U06 439 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 MFN1Q8IWA4 741 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 USP13Q92995 863 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 FUBP1Q96AE4 644 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 NSUN5Q96P11 429 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 VCX3BQ9H321 246 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 ZNF576Q9H609 170 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 CCDC167Q9P0B6 97 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 GALPQ9UBC7 116 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 BCAP29Q9UHQ4 241 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 TRMT6Q9UJA5 497 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 FNDC3AQ9Y2H6 1198 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 ZNF711Q9Y462 761 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 COMMD10Q9Y6G5 202 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 HELZP42694 1942 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 ATP6AP2A0A1C7CYW4 349 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 NPEPPSL1A6NEC2 478 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 CDC7O00311 574 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 PPP6CO00743 305 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 NIPSNAP2O75323 286 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 ATP6AP2O75787 350 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 MT-CO1P00395 513 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 RB1P06400 928 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 ADARP55265 1226 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 AP1S1P61966 158 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 LCP2Q13094 533 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 GRIN2CQ14957 1233 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 MMEL1Q495T6 779 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 SIDT2Q8NBJ9 832 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 MICAL1Q8TDZ2 1067 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 TRPC4APQ8TEL6 797 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 TWIST2Q8WVJ9 160 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 MYO19Q96H55 970 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 C3orf30Q96M34 536 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 SLC30A3Q99726 388 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 C2orf49Q9BVC5 232 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 IL17CQ9P0M4 197 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 LSM7Q9UK45 103 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 RWDD3Q9Y3V2 267 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 PKP3Q9Y446 797 aa14.36□□□□□ -0.11
RABGGTA-212ENST00000559974 CARNS1A5YM72 827 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 STX16-NPEPL1H3BU86 382 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 BTN3A1O00481 513 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 SMNDC1O75940 238 aaKnown RBP eCLIP14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 PGLSO95336 258 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 TSPAN12O95859 305 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 SNRPB2P08579 225 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 RPS17P08708 135 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 PTGER3P43115 390 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 ACADVLP49748 655 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 FOXA1P55317 472 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 STX1BP61266 288 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 NAA20P61599 178 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 XIAPP98170 497 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 CLCQ05315 142 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 LRP8Q14114 963 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 ARMC12Q5T9G4 340 aa14.35□□□□□ -0.11
RABGGTA-212ENST00000559974 ANKS6Q68DC2 871 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms