RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 NRDCO43847 1150 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 FZD6O60353 706 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 MAFKO60675 156 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 HEXIM1O94992 359 aaKnown RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 ECEL1O95672 775 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 CPNE6O95741 557 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 EML2O95834 649 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 PDHA1P08559 390 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 ELFN1P0C7U0 828 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 MYCLP1P12525 358 aaPredicted RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 CCNB1P14635 433 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 PSMA2P25787 234 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 ETV3P41162 512 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 HCAR3P49019 387 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 SCNN1BP51168 640 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 AP1S1P61966 158 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 CDK3Q00526 305 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 UBXN1Q04323 297 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 BCL2L1Q07817 233 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 TRAF2Q12933 501 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 SQSTM1Q13501 440 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 RFTN1Q14699 578 aaPredicted RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 SETDB1Q15047 1291 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 ACOX1Q15067 660 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 FKBP15Q5T1M5 1219 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 DCUN1D2Q6PH85 259 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 Q6ZVL8 140 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 USP53Q70EK8 1073 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 ZNF571Q7Z3V5 609 aaPredicted RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 TECPR1Q7Z6L1 1165 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 TSPAN33Q86UF1 283 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 LUZP1Q86V48 1076 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 HEATR4Q86WZ0 1026 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 BMPERQ8N8U9 685 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 RCBTB1Q8NDN9 531 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 NEK11Q8NG66 645 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 ATL2Q8NHH9 583 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 KIAA1524Q8TCG1 905 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 PIH1D2Q8WWB5 315 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 NKD1Q969G9 470 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 DTD2Q96FN9 168 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 MCCC1Q96RQ3 725 aaPredicted RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 NUDCD1Q96RS6 583 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 AGAP2Q99490 1192 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 SEMA3CQ99985 751 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 CINPQ9BW66 212 aaPredicted RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 SLC12A9Q9BXP2 914 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 SPRY4Q9C004 299 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 TRIM4Q9C037 500 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 B3GNT4Q9C0J1 378 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 DPEP2Q9H4A9 486 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 CLMPQ9H6B4 373 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 WDR26Q9H7D7 661 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 CARS2Q9HA77 564 aaKnown RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 NOD2Q9HC29 1040 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 NEUROD4Q9HD90 331 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 SEPT11Q9NVA2 429 aaKnown RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 TMEM9Q9P0T7 183 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 SCHIP1Q9P0W5 487 aaPredicted RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 TAAR2Q9P1P5 351 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 SUFUQ9UMX1 484 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 SLC17A4Q9Y2C5 497 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 PPIL1Q9Y3C6 166 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 AHCTF1Q8WYP5 2266 aa5.78□□□□□ -1.48
USP3-215ENST00000559771 TLN1Q9Y490 2541 aaKnown RBP5.78□□□□□ -1.48
USP3-215ENST00000559771 UTP20O75691 2785 aaKnown RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 IGHV1OR21-1A0A087WYE8 117 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 A0A1W2PQC6 194 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 LRRC53A6NM62 1247 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 EIF3CLB5ME19 914 aaKnown RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 KIF2AO00139 706 aaPredicted RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 RRP9O43818 475 aaKnown RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 PGLSO95336 258 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 FTLP02792 175 aaPredicted RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 IVLP07476 585 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 JMJD7P0C870 316 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 THRAP10827 490 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 FERP16591 822 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 IL4RP24394 825 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 MPSTP25325 297 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 CFPP27918 469 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 TEAD1P28347 426 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 ALDH4A1P30038 563 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 VIPR1P32241 457 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 ADCY8P40145 1251 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 GNPDA1P46926 289 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 CSRP3P50461 194 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 LIMK2P53671 638 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 MAPK10P53779 464 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 MAXP61244 160 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 POLR2LP62875 67 aaKnown RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 MYL5Q02045 173 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 DPTQ07507 201 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 ARHGEF7Q14155 803 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 DPYSL2Q16555 572 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 AMZ1Q400G9 498 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 OXLD1Q5BKU9 147 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 PPP6R3Q5H9R7 873 aaPredicted RBP5.77□□□□□ -1.49
USP3-215ENST00000559771 CFAP58Q5T655 872 aa5.77□□□□□ -1.49
USP3-215ENST00000559771 PHF19Q5T6S3 580 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms