RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 HMX2A2RU54 273 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 RAD51BO15315 384 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 KRT38O76015 456 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 IGHV4-34P06331 123 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 PYGLP06737 847 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 MYZAPP0CAP1 466 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 CNTFP26441 200 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 PTGER3P43115 390 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 ABCG1P45844 678 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 LIMK2P53671 638 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 IRF4Q15306 451 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 PNCKQ6P2M8 343 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 TSSK4Q6SA08 328 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 CYP4X1Q8N118 509 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 FBXL6Q8N531 539 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 LPGAT1Q92604 370 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 GLYATL1Q969I3 302 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 LENG8Q96PV6 779 aaPredicted RBP17.93■□□□□ 0.46
CLPX-203ENST00000558958 MBNL1Q9NR56 388 aaKnown RBP17.93■□□□□ 0.46
CLPX-203ENST00000558958 ZDHHC3Q9NYG2 299 aa17.93■□□□□ 0.46
CLPX-203ENST00000558958 CNOT6Q9ULM6 557 aaKnown RBP17.93■□□□□ 0.46
CLPX-203ENST00000558958 IGLV3-16A0A075B6K0 115 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 GOLGA6L10A6NI86 522 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 SLC31A1O15431 190 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 OR1I1O60431 355 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 KRT37O76014 449 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 ITGA2BP08514 1039 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 TEAD1P28347 426 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 ILF2Q12905 390 aaKnown RBP17.92■□□□□ 0.46
CLPX-203ENST00000558958 ITIH4Q14624 930 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 TMED2Q15363 201 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 USP39Q53GS9 565 aaKnown RBP17.92■□□□□ 0.46
CLPX-203ENST00000558958 GPRC6AQ5T6X5 926 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 LGSNQ5TDP6 509 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 ADAMTSL4Q6UY14 1074 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 TAOK1Q7L7X3 1001 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 MAML2Q8IZL2 1156 aaPredicted RBP17.92■□□□□ 0.46
CLPX-203ENST00000558958 DTWD2Q8NBA8 298 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 DDHD1Q8NEL9 900 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 PGM2Q96G03 612 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 ATXN7L3BQ96GX2 97 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 VPS39Q96JC1 886 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 COPS8Q99627 209 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 TMBIM4Q9HC24 238 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 MBD1Q9UIS9 605 aaPredicted RBP17.92■□□□□ 0.46
CLPX-203ENST00000558958 INVSQ9Y283 1065 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 CRYL1Q9Y2S2 319 aa17.92■□□□□ 0.46
CLPX-203ENST00000558958 IQANK1A0A1B0GTG1 560 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 RGS16O15492 202 aaPredicted RBP17.91■□□□□ 0.46
CLPX-203ENST00000558958 OPA1O60313 960 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 PCCBP05166 539 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 SNRPAP09012 282 aaKnown RBP17.91■□□□□ 0.46
CLPX-203ENST00000558958 ADARP55265 1226 aaKnown RBP17.91■□□□□ 0.46
CLPX-203ENST00000558958 BMPR2Q13873 1038 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 MROH9Q5TGP6 573 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 RBFAQ8N0V3 343 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 CNPY4Q8N129 248 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 DENND6BQ8NEG7 585 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 MZB1Q8WU39 189 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 CCDC97Q96F63 343 aaPredicted RBP17.91■□□□□ 0.46
CLPX-203ENST00000558958 PKNOX2Q96KN3 472 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 SPACA7Q96KW9 195 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 GPR22Q99680 433 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 BOCQ9BWV1 1114 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 PCED1AQ9H1Q7 454 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 P2RY12Q9H244 342 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 CENPHQ9H3R5 247 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 EPHX3Q9H6B9 360 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 CORO1CQ9ULV4 474 aaPredicted RBP17.91■□□□□ 0.46
CLPX-203ENST00000558958 MTO1Q9Y2Z2 717 aaKnown RBP17.91■□□□□ 0.46
CLPX-203ENST00000558958 DOCK9Q9BZ29 2069 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 PLXNB3Q9ULL4 1909 aa17.91■□□□□ 0.46
CLPX-203ENST00000558958 UBA6A0AVT1 1052 aaPredicted RBP17.9■□□□□ 0.46
CLPX-203ENST00000558958 INPP4BO15327 924 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 NDUFS2O75306 463 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 FSBPO95073 299 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 SLC25A14O95258 325 aaPredicted RBP17.9■□□□□ 0.46
CLPX-203ENST00000558958 ZNF7P17097 686 aaPredicted RBP17.9■□□□□ 0.46
CLPX-203ENST00000558958 HNRNPA2B1P22626 353 aaKnown RBP17.9■□□□□ 0.46
CLPX-203ENST00000558958 IGFALSP35858 605 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 TRIM23P36406 574 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 B4GALNT1Q00973 533 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 INPP5AQ14642 412 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 TNFAIP8L3Q5GJ75 292 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 LDLRAP1Q5SW96 308 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 ZNF549Q6P9A3 640 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 WDR5BQ86VZ2 330 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 PHYKPLQ8IUZ5 450 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 CADM4Q8NFZ8 388 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 GDAP1Q8TB36 358 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 BIRC7Q96CA5 298 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 MTBPQ96DY7 904 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 BIRC8Q96P09 236 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 EBF2Q9HAK2 575 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 FZD3Q9NPG1 666 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.9■□□□□ 0.46
CLPX-203ENST00000558958 PLXND1Q9Y4D7 1925 aa17.9■□□□□ 0.46
CLPX-203ENST00000558958 TRIM49D1C9J1S8 452 aa17.89■□□□□ 0.45
CLPX-203ENST00000558958 PRMT5O14744 637 aaPredicted RBP17.89■□□□□ 0.45
CLPX-203ENST00000558958 SYF2O95926 243 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms