RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ACRV1P26436 265 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 SKIV2L2P42285 1042 aaKnown RBP12.31□□□□□ -0.44
TPM1-209ENST00000558072 DPP6P42658 865 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 SLC1A2P43004 574 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 FNTBP49356 437 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 LIMK2P53671 638 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 YPEL5P62699 121 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 POU4F1Q01851 419 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 ZNF844Q08AG5 666 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 ZNF528Q3MIS6 628 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 AGBL2Q5U5Z8 902 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 FAM45BPQ6NSW5 357 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 PNCKQ6P2M8 343 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
TPM1-209ENST00000558072 LCA5Q86VQ0 697 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 WDR5BQ86VZ2 330 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 LONP2Q86WA8 852 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 DCP2Q8IU60 420 aaKnown RBP12.31□□□□□ -0.44
TPM1-209ENST00000558072 DEFB119Q8N690 84 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 DTWD2Q8NBA8 298 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 DDHD1Q8NEL9 900 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 GDAP1Q8TB36 358 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 FAM45AQ8TCE6 357 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 ACMSDQ8TDX5 336 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 GLYATL1Q969I3 302 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 SKA1Q96BD8 255 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 ALKBH8Q96BT7 664 aaKnown RBP12.31□□□□□ -0.44
TPM1-209ENST00000558072 PANX3Q96QZ0 392 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 SUDS3Q9H7L9 328 aaPredicted RBP12.31□□□□□ -0.44
TPM1-209ENST00000558072 GNPTGQ9UJJ9 305 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 FNDC3AQ9Y2H6 1198 aaKnown RBP12.31□□□□□ -0.44
TPM1-209ENST00000558072 IGHV1OR15-9A0A0B4J2B8 117 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 HMGB1P1B2RPK0 211 aaPredicted RBP12.3□□□□□ -0.44
TPM1-209ENST00000558072 CACNB4O00305 520 aaPredicted RBP12.3□□□□□ -0.44
TPM1-209ENST00000558072 SLC25A14O95258 325 aaPredicted RBP12.3□□□□□ -0.44
TPM1-209ENST00000558072 S1PR4O95977 384 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 PAK4O96013 591 aaPredicted RBP12.3□□□□□ -0.44
TPM1-209ENST00000558072 C1QAP02745 245 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 AHSGP02765 367 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 MT-ND3P03897 115 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 SHBGP04278 402 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 ITGA2BP08514 1039 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 OR56A5P0C7T3 313 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 BCKDHBP21953 392 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 HTR1BP28222 390 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 CRABP2P29373 138 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 AVPR2P30518 371 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 AKT1P31749 480 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 ACSL1P33121 698 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 SERPINB8P50452 374 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 CSTF1Q05048 431 aaKnown RBP12.3□□□□□ -0.44
TPM1-209ENST00000558072 CTBP1Q13363 440 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 PTPRCAPQ14761 206 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 SMAD1Q15797 465 aaKnown RBP12.3□□□□□ -0.44
TPM1-209ENST00000558072 ATP13A5Q4VNC0 1218 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 KDM7AQ6ZMT4 941 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 TIFABQ6ZNK6 161 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 ZC3HC1Q86WB0 502 aaKnown RBP12.3□□□□□ -0.44
TPM1-209ENST00000558072 SERPINA9Q86WD7 417 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 DCAKDQ8WVC6 231 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 SCAMP4Q969E2 229 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 HIC2Q96JB3 615 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 TSNARE1Q96NA8 513 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 AGAP2Q99490 1192 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 TRIM56Q9BRZ2 755 aaKnown RBP12.3□□□□□ -0.44
TPM1-209ENST00000558072 WDR26Q9H7D7 661 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 RMI1Q9H9A7 625 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 POPDC3Q9HBV1 291 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 TRIM39Q9HCM9 518 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 KLHL42Q9P2K6 505 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 ZFR2Q9UPR6 939 aaKnown RBP12.3□□□□□ -0.44
TPM1-209ENST00000558072 ACTL7BQ9Y614 415 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 LRRK1Q38SD2 2015 aa12.3□□□□□ -0.44
TPM1-209ENST00000558072 NUMA1Q14980 2115 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 BDP1A6H8Y1 2624 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 SCN8AQ9UQD0 1980 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 TRPM6Q9BX84 2022 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 UBA6A0AVT1 1052 aaPredicted RBP12.29□□□□□ -0.44
TPM1-209ENST00000558072 CXorf49A8MYA2 514 aaPredicted RBP12.29□□□□□ -0.44
TPM1-209ENST00000558072 GOLGA8TH3BQL2 631 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 KCNJ13O60928 360 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 VPS26AO75436 327 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 FTH1P02794 183 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 MPOP05164 745 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 PKMP14618 531 aaKnown RBP12.29□□□□□ -0.44
TPM1-209ENST00000558072 TRIM23P36406 574 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 SLC26A3P40879 764 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 PPP2CBP62714 309 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 PPP2CAP67775 309 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 PLOD1Q02809 727 aaPredicted RBP12.29□□□□□ -0.44
TPM1-209ENST00000558072 OVGP1Q12889 678 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 PTK2BQ14289 1009 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 WSCD2Q2TBF2 565 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 TTLL9Q3SXZ7 439 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 TAF1BQ53T94 588 aaPredicted RBP12.29□□□□□ -0.44
TPM1-209ENST00000558072 WDR45BQ5MNZ6 344 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 SEL1L3Q68CR1 1132 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 PTRHD1Q6GMV3 140 aaKnown RBP12.29□□□□□ -0.44
TPM1-209ENST00000558072 LRRC8EQ6NSJ5 796 aa12.29□□□□□ -0.44
TPM1-209ENST00000558072 RFLNAQ6ZTI6 216 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms