RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TEX44Q53QW1 395 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 C1orf146Q5VVC0 180 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 IL23RQ5VWK5 629 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 DCLRE1AQ6PJP8 1040 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 CES3Q6UWW8 571 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ATG14Q6ZNE5 492 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ARHGAP12Q8IWW6 846 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 BBS7Q8IWZ6 715 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 PLD6Q8N2A8 252 aaKnown RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 PCSK9Q8NBP7 692 aaKnown RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ICA1LQ8NDH6 482 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 OR52K1Q8NGK4 314 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 PTCD2Q8WV60 388 aaKnown RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 UTP4Q969X6 686 aaKnown RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 CIDECQ96AQ7 238 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 MCMBPQ9BTE3 642 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 CINPQ9BW66 212 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 TNKS2Q9H2K2 1166 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 XKR8Q9H6D3 395 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 EPS8L2Q9H6S3 715 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 CHMP1AQ9HD42 196 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 NPHS2Q9NP85 383 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ARHGEF3Q9NR81 526 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 GLRX2Q9NS18 164 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 INTS10Q9NVR2 710 aaKnown RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 IL37Q9NZH6 218 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 TBC1D14Q9P2M4 693 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 EMCNQ9ULC0 261 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ARHGAP26Q9UNA1 814 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 PLCL2Q9UPR0 1127 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 RAD54BQ9Y620 910 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 CHD7Q9P2D1 2997 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ZCWPW2A0A1B0GU75 182 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ACOD1A6NK06 481 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 C2CD2LO14523 706 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 KLF11O14901 512 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CLOCKO15516 846 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PDPK1O15530 556 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CACNG3O60359 315 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 F9P00740 461 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 IL1BP01584 269 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 HMGN1P05114 100 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 RB1P06400 928 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PRG2P13727 222 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 HOXB1P14653 301 aaPredicted RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ETS2P15036 469 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 RAG1P15918 1043 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PGAM1P18669 254 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TYMPP19971 482 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 M6PRP20645 277 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 GMPRP36959 345 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ARSDP51689 593 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 AKR1D1P51857 326 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 SP3Q02447 781 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 YWHAHQ04917 246 aaPredicted RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 KRBOX4Q5JUW0 171 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 LHX8Q68G74 356 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 SULT1C3Q6IMI6 304 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TIFABQ6ZNK6 161 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PID1Q7Z2X4 250 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TMEM135Q86UB9 458 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CARFQ8N187 725 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 KIF2BQ8N4N8 673 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ZSCAN1Q8NBB4 408 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 FBXO22Q8NEZ5 403 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 GPR156Q8NFN8 814 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 HUS1BQ8NHY5 278 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CELF6Q96J87 481 aaKnown RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ZFYVE19Q96K21 471 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 SMOC2Q9H3U7 446 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TFB2MQ9H5Q4 396 aaKnown RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ECT2Q9H8V3 914 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 GORASP2Q9H8Y8 452 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 WWOXQ9NZC7 414 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 GMEB2Q9UKD1 530 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 NUDT5Q9UKK9 219 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CDV3Q9UKY7 258 aaKnown RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PCDHB12Q9Y5F1 795 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CAPN8A6NHC0 703 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 FADS2P1A8MWK0 482 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 COPEO14579 308 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 OAZ2O95190 189 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 GOSR1O95249 250 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ALDH1A1P00352 501 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ALDH2P05091 517 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ANXA8P13928 327 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TFEBP19484 476 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 NFKB1P19838 968 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 MAPK8P45983 427 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 GPR15P49685 360 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CASP9P55211 416 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 FAM189BP81408 668 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TIGD6Q17RP2 521 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ANXA8L1Q5VT79 327 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CASC4Q6P4E1 433 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 RNF19BQ6ZMZ0 732 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 C4orf50Q6ZRC1 276 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 FAM124AQ86V42 546 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 HEATR4Q86WZ0 1026 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ARHGAP24Q8N264 748 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms