RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 RNF168Q8IYW5 571 aaPredicted RBP16.95■□□□□ 0.3
PPP4R3A-208ENST00000555462 NCLNQ969V3 563 aa16.95■□□□□ 0.3
PPP4R3A-208ENST00000555462 UBXN10Q96LJ8 280 aa16.95■□□□□ 0.3
PPP4R3A-208ENST00000555462 PPP1R10Q96QC0 940 aaKnown RBP16.95■□□□□ 0.3
PPP4R3A-208ENST00000555462 BEGAINQ9BUH8 593 aa16.95■□□□□ 0.3
PPP4R3A-208ENST00000555462 HERC2P3Q9BVR0 1158 aa16.95■□□□□ 0.3
PPP4R3A-208ENST00000555462 TDRD1Q9BXT4 1180 aaKnown RBP16.95■□□□□ 0.3
PPP4R3A-208ENST00000555462 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.95■□□□□ 0.3
PPP4R3A-208ENST00000555462 ST3GAL5Q9UNP4 418 aa16.95■□□□□ 0.3
PPP4R3A-208ENST00000555462 ARL5CA6NH57 179 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 ARVCFO00192 962 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 CD3EAPO15446 510 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 BMP10O95393 424 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 CD1DP15813 335 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 PIGAP37287 484 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 CAPGP40121 348 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 GDF5P43026 501 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 TRAP1Q12931 704 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 NFATC3Q12968 1075 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 MFSD10Q14728 455 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 SPCS2Q15005 226 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 PIK3R6Q5UE93 754 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 KIAA0930Q6ICG6 404 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 BORAQ6PGQ7 559 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 Q6ZNX1 250 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 DCDC5Q6ZRR9 648 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 RAB44Q7Z6P3 723 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 TOP6BLQ8N6T0 577 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 SIDT2Q8NBJ9 832 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 FRS2Q8WU20 508 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 KCTD13Q8WZ19 329 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 SEPT8Q92599 483 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 CCDC97Q96F63 343 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 HGH1Q9BTY7 390 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 NOL6Q9H6R4 1146 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 PRG3Q9Y2Y8 225 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 MYLKQ15746 1914 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 INMTO95050 263 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 GLP2RO95838 553 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 F9P00740 461 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 CCNA2P20248 432 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 EFNA1P20827 205 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 MYF6P23409 242 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 CSRP3P50461 194 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 RELAQ04206 551 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 GTDC1Q4AE62 458 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 PM20D1Q6GTS8 502 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 PGBD5Q8N414 524 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 ZC3H15Q8WU90 426 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 TMEM125Q96AQ2 219 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 RPRD1AQ96P16 312 aaPredicted RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 C17orf80Q9BSJ5 609 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 CARS2Q9HA77 564 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 LIMD1Q9UGP4 676 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 VPS51Q9UID3 782 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 DAPK2Q9UIK4 370 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 PAIP2BQ9ULR5 123 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 OAS3Q9Y6K5 1087 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 SH3BGRLO75368 114 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 E2F6O75461 281 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 PTGR1Q14914 329 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 FAM45BPQ6NSW5 357 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 SYVN1Q86TM6 617 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 ANKRD46Q86W74 232 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 FAM45AQ8TCE6 357 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 HM13Q8TCT9 377 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 GFM2Q969S9 779 aaKnown RBP16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 SLC10A4Q96EP9 437 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 COX4I2Q96KJ9 171 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 MYRFLQ96LU7 910 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 SLC9A7Q96T83 725 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 IL12RB2Q99665 862 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 RTP3Q9BQQ7 232 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 SEZ6LQ9BYH1 1024 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 CD274Q9NZQ7 290 aa16.94■□□□□ 0.3
PPP4R3A-208ENST00000555462 SBF1O95248 1867 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 RFC2P35250 354 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 SIM2Q14190 667 aaPredicted RBP16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 ZNF792Q3KQV3 632 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 SLC39A12Q504Y0 691 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 TMEM236Q5W0B7 351 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 SMYD5Q6GMV2 418 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 BNIPLQ7Z465 357 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 KLHDC9Q8NEP7 349 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 IGSF8Q969P0 613 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 ZBED2Q9BTP6 218 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 MRPL40Q9NQ50 206 aaKnown RBP16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 WDR70Q9NW82 654 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 SUN2Q9UH99 717 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 A0A0D9SEW6 157 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 GABRDO14764 452 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 IRAK2O43187 625 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 HS6ST1O60243 411 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 TLR5O60602 858 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 ECI2O75521 394 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 C1QCP02747 245 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 CYBBP04839 570 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 OPRL1P41146 370 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 DNAJB13P59910 316 aa16.93■□□□□ 0.3
PPP4R3A-208ENST00000555462 SCAPQ12770 1279 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms