RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 CNOT3O75175 753 aaKnown RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 NME5P56597 212 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 DNAL1Q4LDG9 190 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 LY6G5CQ5SRR4 150 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 METTL21CQ5VZV1 264 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 SUN5Q8TC36 379 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 CYB5D2Q8WUJ1 264 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 SLC9A3R1O14745 358 aaPredicted RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 ZBTB11O95625 1053 aaPredicted RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 CCDC159P0C7I6 412 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 FAM58BPP0C7Q3 252 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 MAGEA6P43360 314 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 STT3AP46977 705 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 PFKPQ01813 784 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 BOP1Q14137 746 aaKnown RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 PDCD4Q53EL6 469 aaKnown RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 PPP2R2DQ66LE6 453 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 LRRC8EQ6NSJ5 796 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 GPR141Q7Z602 305 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 AMIGO2Q86SJ2 522 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 APCDD1Q8J025 514 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 FSTL5Q8N475 847 aaPredicted RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 STYXQ8WUJ0 223 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 SSU72Q9NP77 194 aaKnown RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 STK39Q9UEW8 545 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 LZTS3O60299 673 aaPredicted RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 IGLV3-25P01717 112 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 ZNF7P17097 686 aaPredicted RBP16.48■□□□□ 0.23
PCNX1-209ENST00000554879 IGFBP4P22692 258 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 HMOX2P30519 316 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 TRPC1P48995 793 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 SLC18A2Q05940 514 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 DLG1Q12959 904 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 VWA5B1Q5TIE3 1220 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 WBP2Q969T9 261 aa16.48■□□□□ 0.23
PCNX1-209ENST00000554879 LRRC37A2A6NM11 1700 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 ZCWPW2A0A1B0GU75 182 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 MFN2O95140 757 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 UQCRBP14927 111 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 PORP16435 677 aaPredicted RBP16.47■□□□□ 0.23
PCNX1-209ENST00000554879 ARSDP51689 593 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 NR1D2Q14995 579 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 GALNTL6Q49A17 601 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 USP45Q70EL2 814 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 NRG4Q8WWG1 115 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 CLIP3Q96DZ5 547 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 HEPHQ9BQS7 1158 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 POLR3BQ9NW08 1133 aaPredicted RBP16.47■□□□□ 0.23
PCNX1-209ENST00000554879 PEX2P28328 305 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 CDKN2AIPNLQ96HQ2 116 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 ZNF599Q96NL3 588 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 PSKH2Q96QS6 385 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 DUS2Q9NX74 493 aaKnown RBP16.47■□□□□ 0.23
PCNX1-209ENST00000554879 CD84Q9UIB8 345 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 FADS3Q9Y5Q0 445 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 HEMK1Q9Y5R4 338 aaPredicted RBP16.47■□□□□ 0.23
PCNX1-209ENST00000554879 SHROOM3Q8TF72 1996 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 CFAP99D6REC4 459 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 GRM6O15303 877 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 DCXO43602 365 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 KRT8P05787 483 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 HSPA8P11142 646 aaKnown RBP16.47■□□□□ 0.23
PCNX1-209ENST00000554879 DDX5P17844 614 aaKnown RBP16.47■□□□□ 0.23
PCNX1-209ENST00000554879 WASP42768 502 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 SLC25A3Q00325 362 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 FAM45BPQ6NSW5 357 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 RANBP10Q6VN20 620 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 PIM3Q86V86 326 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 ZNF786Q8N393 782 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 RNF148Q8N7C7 305 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 FAM45AQ8TCE6 357 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 MARK4Q96L34 752 aa16.47■□□□□ 0.23
PCNX1-209ENST00000554879 A0A087X1B8 175 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 ABLIM3O94929 683 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 NR4A1P22736 598 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 SERPINA13PQ6UXR4 307 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 Q6ZVU0 165 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 GAREM2Q75VX8 874 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 HEXDCQ8WVB3 486 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 DACT3Q96B18 629 aaPredicted RBP16.46■□□□□ 0.23
PCNX1-209ENST00000554879 TTLL2Q9BWV7 592 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 VN1R3Q9BXE9 311 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 SUN2Q9UH99 717 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 AURKAO14965 403 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 SLC7A4O43246 635 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 TNFAIP8O95379 198 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 ENO3P13929 434 aaPredicted RBP16.46■□□□□ 0.23
PCNX1-209ENST00000554879 SYTL3Q4VX76 610 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 IQCF2Q8IXL9 164 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 FBXO39Q8N4B4 442 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 PTGR2Q8N8N7 351 aaPredicted RBP16.46■□□□□ 0.23
PCNX1-209ENST00000554879 KLF16Q9BXK1 252 aaPredicted RBP16.46■□□□□ 0.23
PCNX1-209ENST00000554879 TBC1D14Q9P2M4 693 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 RSL24D1Q9UHA3 163 aaKnown RBP16.46■□□□□ 0.23
PCNX1-209ENST00000554879 RWDD3Q9Y3V2 267 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 ANKRD66B4E2M5 251 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 CES1P23141 567 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 RGRP47804 291 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 LAYNQ6UX15 382 aa16.46■□□□□ 0.23
PCNX1-209ENST00000554879 NUDT18Q6ZVK8 323 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms