RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ALG14Q96F25 216 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 CELF6Q96J87 481 aaKnown RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 LCORQ96JN0 433 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 FAM118BQ9BPY3 351 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 TUBB2BQ9BVA1 445 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 TRMT61BQ9BVS5 477 aaKnown RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 BBS2Q9BXC9 721 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 AP1M1Q9BXS5 423 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 SLC39A8Q9C0K1 460 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 IGSF9Q9P2J2 1179 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 RNF14Q9UBS8 474 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 CNOT11Q9UKZ1 510 aaKnown RBP6.4□□□□□ -1.38
SCFD1-212ENST00000554486 TBC1D30Q9Y2I9 924 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 HEY1Q9Y5J3 304 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 OR51B4Q9Y5P0 310 aa6.4□□□□□ -1.38
SCFD1-212ENST00000554486 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 A0A0D9SEW6 157 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 ILVBLA1L0T0 632 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 TYW5A2RUC4 315 aaKnown RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 RASA4BC9J798 803 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 H0Y626 953 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 TRIM24O15164 1050 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 RASA4O43374 803 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 LIASO43766 372 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 NARSO43776 548 aaKnown RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 RAMP2O60895 175 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 RHOCP08134 193 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 HNRNPLP14866 589 aaKnown RBP eCLIP6.39□□□□□ -1.391e-7■□□□□ 8.4
SCFD1-212ENST00000554486 HLA-FP30511 346 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 CD70P32970 193 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 CNR2P34972 360 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 SERPINB6P35237 376 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 ACVRL1P37023 503 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 OPRD1P41143 372 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 BUD31P41223 144 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 CSKP41240 450 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 PAFAH1B1P43034 410 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 NR2C2P49116 596 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 PAPOLAP51003 745 aaKnown RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 NEK2P51955 445 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 NDST2P52849 883 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 PLK1P53350 603 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 EIF3EP60228 445 aaKnown RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 GNA12Q03113 381 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 GAD2Q05329 585 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 LMAN2Q12907 356 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 ZNF177Q13360 481 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 PCOLCEQ15113 449 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 NOMO1Q15155 1222 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 CYP1B1Q16678 543 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 ITPRIPL2Q3MIP1 535 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 CCDC181Q5TID7 509 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 NAIF1Q69YI7 327 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 TTC27Q6P3X3 843 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 PGM2L1Q6PCE3 622 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 B4GALNT4Q76KP1 1039 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 SETD3Q86TU7 594 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 MFN1Q8IWA4 741 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 LGI4Q8N135 537 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 CPA6Q8N4T0 437 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 CDYL2Q8N8U2 506 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 TTC8Q8TAM2 541 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 SLC35B2Q8TB61 432 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 MAIP1Q8WWC4 291 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 C1orf54Q8WWF1 131 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 JADE3Q92613 823 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 P3H4Q92791 437 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 HMCESQ96FZ2 354 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 OLFM3Q96PB7 478 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 NAP1L3Q99457 506 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 FEM1AQ9BSK4 669 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 BDH2Q9BUT1 245 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 SLC13A1Q9BZW2 595 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 C10orf88Q9H8K7 445 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 BRD9Q9H8M2 597 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 TRPV5Q9NQA5 729 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 RBM12Q9NTZ6 932 aaKnown RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 ABCB8Q9NUT2 735 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 DNAJC17Q9NVM6 304 aaKnown RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 DNAJC28Q9NX36 388 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 DONSONQ9NYP3 566 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 GTSE1Q9NYZ3 720 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 INTS6Q9UL03 887 aaKnown RBP6.39□□□□□ -1.39
SCFD1-212ENST00000554486 DNPEPQ9ULA0 475 aa6.39□□□□□ -1.39
SCFD1-212ENST00000554486 ARHGAP42A6NI28 874 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 SHISA7A6NL88 538 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 H7C0C1 242 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 DFFAO00273 331 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 PRICKLE3O43900 615 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 SNAP91O60641 907 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 PHF2O75151 1096 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 TULP3O75386 442 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 ZMPSTE24O75844 475 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 PEX11BO96011 259 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 OSMP13725 252 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 AGXTP21549 392 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 GARSP41250 739 aaKnown RBP6.38□□□□□ -1.39
SCFD1-212ENST00000554486 ATP5OP48047 213 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 KCNJ1P48048 391 aa6.38□□□□□ -1.39
SCFD1-212ENST00000554486 NUMBP49757 651 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms