RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 EZRP15311 586 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 CD1DP15813 335 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF37AP17032 561 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF7P17097 686 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ITGALP20701 1170 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 IMPDH1P20839 514 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 GRNP28799 593 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 MC4RP32245 332 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 SLC8A1P32418 973 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 NNMTP40261 264 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 NUMBP49757 651 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 IDH3AP50213 366 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 NAGLUP54802 743 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ERVK-21P61565 698 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 SNRPNP63162 240 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ELF3P78545 371 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ECT2LQ008S8 904 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 CDC16Q13042 620 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 CSHL1Q14406 222 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF77Q15935 545 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 MYLK3Q32MK0 819 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 PRSS36Q5K4E3 855 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 RBM20Q5T481 1227 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 CES4AQ5XG92 561 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 METTL2BQ6P1Q9 378 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 BRAT1Q6PJG6 821 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 TXNDC11Q6PKC3 985 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 LINGO4Q6UY18 593 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ACAD11Q709F0 780 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 USP45Q70EL2 814 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 EFL1Q7Z2Z2 1120 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 CELF5Q8N6W0 485 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 KDM1BQ8NB78 822 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 OR4K2Q8NGD2 314 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 OR13C4Q8NGS5 318 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 WFIKKN2Q8TEU8 576 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 KIAA1191Q96A73 305 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 SLC7A6OSQ96CW6 309 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ECHDC3Q96DC8 303 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 SCRN2Q96FV2 425 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 THOC1Q96FV9 657 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 SCARF2Q96GP6 870 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 EXOC2Q96KP1 924 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 CDCA3Q99618 268 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 CCT7Q99832 543 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 CCDC106Q9BWC9 280 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 OSBPL1AQ9BXW6 950 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 C20orf27Q9GZN8 174 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 NMUR2Q9GZQ4 415 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 ZFYVE1Q9HBF4 777 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 PFDN4Q9NQP4 134 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 SPHK2Q9NRA0 654 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 DZANK1Q9NVP4 752 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 OBP2AQ9NY56 170 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 MARCH4Q9P2E8 410 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 CPSF2Q9P2I0 782 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 STK38LQ9Y2H1 464 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 KCTD3Q9Y597 815 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 OAS3Q9Y6K5 1087 aaKnown RBP7.27□□□□□ -1.25
ATXN3-221ENST00000553498 VWA8A3KMH1 1905 aa7.27□□□□□ -1.25
ATXN3-221ENST00000553498 FNDC1Q4ZHG4 1894 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 TRBV5-4A0A0C4DH59 114 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 A8MT66 165 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 AGAP14A8MT82 685 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 SPECC1L-ADORA2AF8WAN1 911 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 STX16-NPEPL1H3BU86 382 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 EIF3FO00303 357 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 STX16O14662 325 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 PRMT5O14744 637 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 AURKAO14965 403 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 GYG2O15488 501 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 HOXC11O43248 304 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 MAGEC1O60732 1142 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 MOSPD3O75425 235 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 GJB3O75712 270 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 SRP72O76094 671 aaKnown RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 RHOBTB1O94844 696 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 PIGNO95427 931 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 SRPRAP08240 638 aaKnown RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 FGF4P08620 206 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 HSPA1AP0DMV8 641 aaKnown RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 HSPA1BP0DMV9 641 aaKnown RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 KITP10721 976 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 SRCP12931 536 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 ZNF30P17039 623 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 TFEBP19484 476 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 TARSP26639 723 aaKnown RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 ADH6P28332 368 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 CD70P32970 193 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 ABCG1P45844 678 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 RECQLP46063 649 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 GLRBP48167 497 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 CDKN2DP55273 166 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 PCBP4P57723 403 aaKnown RBP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 IL2P60568 153 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 HERVK_113P63132 956 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 SF3A3Q12874 501 aaKnown RBP eCLIP7.26□□□□□ -1.25
ATXN3-221ENST00000553498 DLG1Q12959 904 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 TUBB3Q13509 450 aa7.26□□□□□ -1.25
ATXN3-221ENST00000553498 E2F5Q15329 346 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms