RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 GJA4P35212 333 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 CLCN7P51798 805 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 PRKAA2P54646 552 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 ST8SIA6P61647 398 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 ZBTB16Q05516 673 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 RUNX3Q13761 415 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 PDGFRLQ15198 375 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 FNDC3BQ53EP0 1204 aaKnown RBP19.54■□□□□ 0.72
SSH1-209ENST00000551165 HSD11B1LQ7Z5J1 315 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 CPNE9Q8IYJ1 553 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 CBARPQ8N350 705 aaPredicted RBP19.54■□□□□ 0.72
SSH1-209ENST00000551165 SREK1Q8WXA9 508 aaKnown RBP19.54■□□□□ 0.72
SSH1-209ENST00000551165 TNFRSF12AQ9NP84 129 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 MBD1Q9UIS9 605 aaPredicted RBP19.54■□□□□ 0.72
SSH1-209ENST00000551165 TMPRSS11EQ9UL52 423 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 ITM2BQ9Y287 266 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 VPS9D1Q9Y2B5 631 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 CAPN7Q9Y6W3 813 aa19.54■□□□□ 0.72
SSH1-209ENST00000551165 LRRC14BA6NHZ5 514 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 TMEM233B4DJY2 109 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 FCHO1O14526 889 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 VPS26AO75436 327 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 IPO13O94829 963 aaKnown RBP19.53■□□□□ 0.72
SSH1-209ENST00000551165 MTHFD2P13995 350 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 TSPAN8P19075 237 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 IDH3AP50213 366 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 ADARP55265 1226 aaKnown RBP19.53■□□□□ 0.72
SSH1-209ENST00000551165 TSNQ15631 228 aaKnown RBP19.53■□□□□ 0.72
SSH1-209ENST00000551165 FBXO48Q5FWF7 155 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 BRAT1Q6PJG6 821 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 SCAMP4Q969E2 229 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 CDH19Q9H159 772 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 FBRSL1Q9HCM7 1045 aaKnown RBP19.53■□□□□ 0.72
SSH1-209ENST00000551165 CRLS1Q9UJA2 301 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 SLC8A2Q9UPR5 921 aa19.53■□□□□ 0.72
SSH1-209ENST00000551165 PLK4O00444 970 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 H2AFYO75367 372 aaKnown RBP19.52■□□□□ 0.72
SSH1-209ENST00000551165 FSBPO95073 299 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 ESR1P03372 595 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 LAMP2P13473 410 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 SPINT3P49223 89 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 POLR2LP62875 67 aaKnown RBP19.52■□□□□ 0.72
SSH1-209ENST00000551165 ZNF234Q14588 700 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 C9orf64Q5T6V5 341 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 CERS6Q6ZMG9 384 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 GBP7Q8N8V2 638 aaPredicted RBP19.52■□□□□ 0.72
SSH1-209ENST00000551165 TERB1Q8NA31 727 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 KCNJ9Q92806 393 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 PPP1R36Q96LQ0 422 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 RILPQ96NA2 401 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 ATOH8Q96SQ7 321 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 ACOX2Q99424 681 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 COG4Q9H9E3 785 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 ACTR5Q9H9F9 607 aaPredicted RBP19.52■□□□□ 0.72
SSH1-209ENST00000551165 TRMT6Q9UJA5 497 aaKnown RBP19.52■□□□□ 0.72
SSH1-209ENST00000551165 HAO1Q9UJM8 370 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 MUC22E2RYF6 1773 aaPredicted RBP19.52■□□□□ 0.72
SSH1-209ENST00000551165 C16orf96A6NNT2 1141 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 E5RI56 91 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 PFDN6O15212 129 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 JUNP05412 331 aaKnown RBP19.52■□□□□ 0.72
SSH1-209ENST00000551165 DNAJB13P59910 316 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 ZNF805Q5CZA5 627 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 PARS2Q7L3T8 475 aaKnown RBP19.52■□□□□ 0.72
SSH1-209ENST00000551165 C10orf67Q8IYJ2 551 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 NXPE1Q8N323 547 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 KIF2BQ8N4N8 673 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 ILKAPQ9H0C8 392 aaPredicted RBP19.52■□□□□ 0.72
SSH1-209ENST00000551165 WWP1Q9H0M0 922 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 ZNF576Q9H609 170 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 SYTL2Q9HCH5 934 aa19.52■□□□□ 0.72
SSH1-209ENST00000551165 PLXNB3Q9ULL4 1909 aa19.52■□□□□ 0.71
SSH1-209ENST00000551165 TBC1D3BA6NDS4 549 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 NPEPPSL1A6NEC2 478 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 KPNA3O00505 521 aaPredicted RBP19.51■□□□□ 0.71
SSH1-209ENST00000551165 SIX3O95343 332 aaPredicted RBP19.51■□□□□ 0.71
SSH1-209ENST00000551165 SOX9P48436 509 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 VASPP50552 380 aaPredicted RBP19.51■□□□□ 0.71
SSH1-209ENST00000551165 GRIN2CQ14957 1233 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 Q6ZVL8 140 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.51■□□□□ 0.71
SSH1-209ENST00000551165 LINGO1Q96FE5 620 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 OSBPL1AQ9BXW6 950 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 DERL2Q9GZP9 239 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 CLPBQ9H078 707 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 ARL8BQ9NVJ2 186 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 CLDND1Q9NY35 253 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 RAP2CQ9Y3L5 183 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 KIAA1549LQ6ZVL6 1849 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 BRWD1Q9NSI6 2320 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 TSPAN11A1L157 253 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 AGAP14A8MT82 685 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 UPK3BL1B0FP48 263 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 UPK3BL2E5RIL1 263 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 PYGLP06737 847 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 ALOX15P16050 662 aaPredicted RBP19.51■□□□□ 0.71
SSH1-209ENST00000551165 ZNF7P17097 686 aaPredicted RBP19.51■□□□□ 0.71
SSH1-209ENST00000551165 PSMC3P17980 439 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 GDI1P31150 447 aa19.51■□□□□ 0.71
SSH1-209ENST00000551165 LTBRP36941 435 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms