RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 PPM1HQ9ULR3 514 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 NRAPQ86VF7 1730 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 A0A0U1RQS6 177 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 AXIN1O15169 862 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 TNFAIP8O95379 198 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 FGF3P11487 239 aaPredicted RBP14.91□□□□□ -0.02
CUX1-214ENST00000550008 LAG3P18627 525 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 LCP2Q13094 533 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 MAD2L1Q13257 205 aaPredicted RBP14.91□□□□□ -0.02
CUX1-214ENST00000550008 CBX2Q14781 532 aaPredicted RBP14.91□□□□□ -0.02
CUX1-214ENST00000550008 TRIM48Q8IWZ4 208 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 GALPQ9UBC7 116 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 DOLKQ9UPQ8 538 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 KCNH1O95259 989 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 ELFN1P0C7U0 828 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 IDO1P14902 403 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 MIEF2Q96C03 454 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 UNC93B1Q9H1C4 597 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 MOCS1Q9NZB8 636 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 SIRPGQ9P1W8 387 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 PSMD13Q9UNM6 376 aa14.91□□□□□ -0.02
CUX1-214ENST00000550008 FAM189A1O60320 539 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 GALTP07902 379 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 FCGR1AP12314 374 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 XRCC1P18887 633 aaPredicted RBP14.9□□□□□ -0.02
CUX1-214ENST00000550008 THOP1P52888 689 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 PLCL1Q15111 1095 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 RTP2Q5QGT7 225 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 MORN1Q5T089 497 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 EBF2Q9HAK2 575 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 CREBZFQ9NS37 354 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 MCM8Q9UJA3 840 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 ZNF490Q9ULM2 529 aaPredicted RBP14.9□□□□□ -0.02
CUX1-214ENST00000550008 DNAJA2O60884 412 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 ZNF623O75123 536 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 CDK14O94921 469 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 PLA2G4EQ3MJ16 856 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 MPPE1Q53F39 396 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 C6orf52Q5T4I8 152 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 PIK3R6Q5UE93 754 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 ADCK1Q86TW2 530 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 PLD3Q8IV08 490 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 CHPFQ8IZ52 775 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 KCNA7Q96RP8 456 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 MTMR10Q9NXD2 777 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 MYRFQ9Y2G1 1151 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 ABCA3Q99758 1704 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 SNUPNO95149 360 aaKnown RBP14.9□□□□□ -0.02
CUX1-214ENST00000550008 CHN2P52757 468 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 RAD23AP54725 363 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 PLEKHG4Q58EX7 1191 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 TBC1D19Q8N5T2 526 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 PPP3R2Q96LZ3 170 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 CDK5RAP2Q96SN8 1893 aa14.9□□□□□ -0.02
CUX1-214ENST00000550008 UNCXA6NJT0 531 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 AURKAO14965 403 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 WFS1O76024 890 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 PRKAG1P54619 331 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 SGCGQ13326 291 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 CCDC85BQ15834 202 aaPredicted RBP14.89□□□□□ -0.03
CUX1-214ENST00000550008 EMC10Q5UCC4 262 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 TMEM132CQ8N3T6 1108 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 CPSF7Q8N684 471 aaKnown RBP14.89□□□□□ -0.03
CUX1-214ENST00000550008 KREMEN2Q8NCW0 462 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 MPP4Q96JB8 637 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 SYNDIG1Q9H7V2 258 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 RPL26L1Q9UNX3 145 aaKnown RBP14.89□□□□□ -0.03
CUX1-214ENST00000550008 LAMB1P07942 1786 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 HSMCR30P0CW71 290 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 GLDCP23378 1020 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 RPIAP49247 311 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 PGAM4Q8N0Y7 254 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 PARP8Q8N3A8 854 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 TXNDC5Q8NBS9 432 aaKnown RBP14.89□□□□□ -0.03
CUX1-214ENST00000550008 FEM1CQ96JP0 617 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 C8orf48Q96LL4 319 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 KLHL32Q96NJ5 620 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 TCF25Q9BQ70 676 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 DGCR6LQ9BY27 220 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 ZCCHC2Q9C0B9 1178 aaKnown RBP14.89□□□□□ -0.03
CUX1-214ENST00000550008 ARIH1Q9Y4X5 557 aaPredicted RBP14.89□□□□□ -0.03
CUX1-214ENST00000550008 STK16O75716 305 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 GDF5P43026 501 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 ARSDP51689 593 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 REP15Q6BDI9 236 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 CCDC28BQ9BUN5 200 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 C9orf16Q9BUW7 83 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 WDR6Q9NNW5 1121 aaKnown RBP14.89□□□□□ -0.03
CUX1-214ENST00000550008 SNX6Q9UNH7 406 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 COPG1Q9Y678 874 aaKnown RBP14.89□□□□□ -0.03
CUX1-214ENST00000550008 NUMA1Q14980 2115 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 C15orf38-AP3S2A0A0A6YYH1 394 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 CRATP43155 626 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 AQP4P55087 323 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 NAE1Q13564 534 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 CST9Q5W186 159 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 TXNDC11Q6PKC3 985 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 ARPINQ7Z6K5 226 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 CEP97Q8IW35 865 aa14.89□□□□□ -0.03
CUX1-214ENST00000550008 PTCD3Q96EY7 689 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms