RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 CCDC163A0A0D9SF12 145 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 FAM95CA0A1B0GW59 222 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 TMEM221A6NGB7 291 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 M0R296 226 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 QSOX1O00391 747 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 UGT1A6P19224 532 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 UGT1A1P22309 533 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 UGT1A4P22310 534 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 UGT1A3P35503 534 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 UGT1A5P35504 534 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 GPR1P46091 355 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 CDKN1CP49918 316 aaPredicted RBP17.25■□□□□ 0.35
LETMD1-220ENST00000549686 SLC12A2P55011 1212 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 LRRC14Q15048 493 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 TTMPQ5BVD1 217 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 SEL1L3Q68CR1 1132 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 RAET1GQ6H3X3 334 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 CNSTQ6PJW8 725 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 ADAMTSL4Q6UY14 1074 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 CYP4X1Q8N118 509 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 DCLK2Q8N568 766 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 DCUN1D1Q96GG9 259 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 CABS1Q96KC9 395 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 LENG8Q96PV6 779 aaPredicted RBP17.25■□□□□ 0.35
LETMD1-220ENST00000549686 FAM126AQ9BYI3 521 aaPredicted RBP17.25■□□□□ 0.35
LETMD1-220ENST00000549686 ZCCHC2Q9C0B9 1178 aaKnown RBP17.25■□□□□ 0.35
LETMD1-220ENST00000549686 CLPBQ9H078 707 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 C2orf42Q9NWW7 574 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 WSB2Q9NYS7 404 aaPredicted RBP17.25■□□□□ 0.35
LETMD1-220ENST00000549686 GNPTGQ9UJJ9 305 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 NOVA2Q9UNW9 492 aaKnown RBP17.25■□□□□ 0.35
LETMD1-220ENST00000549686 ATG2BQ96BY7 2078 aa17.25■□□□□ 0.35
LETMD1-220ENST00000549686 UBA6A0AVT1 1052 aaPredicted RBP17.24■□□□□ 0.35
LETMD1-220ENST00000549686 HMX2A2RU54 273 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 FAM47DPA6NHR8 397 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 C10orf142B7Z368 130 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 MPOP05164 745 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 PRSS56P0CW18 603 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 PKMP14618 531 aaKnown RBP17.24■□□□□ 0.35
LETMD1-220ENST00000549686 CD9P21926 228 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 CRABP2P29373 138 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 ACSL1P33121 698 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 MAGEA12P43365 314 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 BMPR2Q13873 1038 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 USP10Q14694 798 aaKnown RBP17.24■□□□□ 0.35
LETMD1-220ENST00000549686 GPRC6AQ5T6X5 926 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 PNCKQ6P2M8 343 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 GPATCH11Q8N954 259 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 TOE1Q96GM8 510 aaKnown RBP17.24■□□□□ 0.35
LETMD1-220ENST00000549686 SPACA7Q96KW9 195 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 SMC6Q96SB8 1091 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 AARSD1Q9BTE6 412 aaKnown RBP17.24■□□□□ 0.35
LETMD1-220ENST00000549686 P2RY12Q9H244 342 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 POPDC3Q9HBV1 291 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 SSU72Q9NP77 194 aaKnown RBP17.24■□□□□ 0.35
LETMD1-220ENST00000549686 CYP8B1Q9UNU6 501 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 CRYL1Q9Y2S2 319 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 MTO1Q9Y2Z2 717 aaKnown RBP17.24■□□□□ 0.35
LETMD1-220ENST00000549686 VWA7Q9Y334 891 aa17.24■□□□□ 0.35
LETMD1-220ENST00000549686 ZNF106Q9H2Y7 1883 aaKnown RBP17.23■□□□□ 0.35
LETMD1-220ENST00000549686 SCN8AQ9UQD0 1980 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 PRR23AA6NEV1 266 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 FADS2P1A8MWK0 482 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 K7ESF4 209 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 AXIN1O15169 862 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 LATO43561 262 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 AP2A2O94973 939 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 STMN1P16949 149 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 MSH3P20585 1137 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 TYK2P29597 1187 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 MAGOHP61326 146 aaKnown RBP17.23■□□□□ 0.35
LETMD1-220ENST00000549686 WSCD2Q2TBF2 565 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 ZNF789Q5FWF6 425 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 HECTD2Q5U5R9 776 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 KIAA0895LQ68EN5 471 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 SLC36A4Q6YBV0 504 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 MACC1Q6ZN28 852 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 EXOC3L1Q86VI1 746 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 LCA5Q86VQ0 697 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 SRRM1Q8IYB3 904 aaKnown RBP17.23■□□□□ 0.35
LETMD1-220ENST00000549686 TP53I13Q8NBR0 393 aaPredicted RBP17.23■□□□□ 0.35
LETMD1-220ENST00000549686 GDAP1Q8TB36 358 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 ATXN7L3BQ96GX2 97 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 ELMO2Q96JJ3 720 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 TSSK1BQ9BXA7 367 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 SPATA6Q9NWH7 488 aaPredicted RBP17.23■□□□□ 0.35
LETMD1-220ENST00000549686 FAM53CQ9NYF3 392 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 SLC39A10Q9ULF5 831 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 DMTF1Q9Y222 760 aa17.23■□□□□ 0.35
LETMD1-220ENST00000549686 IGHV1OR15-9A0A0B4J2B8 117 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 TOR1BO14657 336 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 GPR39O43194 453 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 RFPL1O75677 317 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 SLC25A14O95258 325 aaPredicted RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 PAK4O96013 591 aaPredicted RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 SOD1P00441 154 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 PDGFBP01127 241 aaPredicted RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 ALDOAP04075 364 aaKnown RBP17.22■□□□□ 0.35
LETMD1-220ENST00000549686 FMO4P31512 558 aa17.22■□□□□ 0.35
LETMD1-220ENST00000549686 AKT1P31749 480 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms