RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 EXO1Q9UQ84 846 aaKnown RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 TNFSF13BQ9Y275 285 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 R3HDM2Q9Y2K5 976 aaKnown RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 HEMK1Q9Y5R4 338 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 MAP3K4Q9Y6R4 1608 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 MADDQ8WXG6 1647 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 MROH2BQ7Z745 1585 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 TCRBV7S3A2A0A539 114 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 KRT87PA6NCN2 255 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 B4DGG1 531 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 NPIPB11E5RHQ5 1161 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 H3BQ06 376 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 SMAD6O43541 496 aaKnown RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 KINO60870 393 aaKnown RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 SLCO2B1O94956 709 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 TRUB2O95900 331 aaKnown RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 RFPL3SP0C7P2 107 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 GJA1P17302 382 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 GAP43P17677 238 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 TNFRSF1BP20333 461 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 YWHAQP27348 245 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 IDUAP35475 653 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 MTHFRP42898 656 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 ME1P48163 572 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 NT5C2P49902 561 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 ARSEP51690 589 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 TPD52P55327 224 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 ARF5P84085 180 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 RPA4Q13156 261 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 CBX3Q13185 183 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 TUBB2AQ13885 445 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 SNAPC1Q16533 368 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 TCTN1Q2MV58 587 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 C10orf76Q5T2E6 689 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 LCTLQ6UWM7 567 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 DHRS13Q6UX07 377 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 SLC9B2Q86UD5 537 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 AACSQ86V21 672 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 MFN1Q8IWA4 741 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 WDR63Q8IWG1 891 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 DHX40Q8IX18 779 aaKnown RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 KLHL7Q8IXQ5 586 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 ZCCHC9Q8N567 271 aaKnown RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 ATAD1Q8NBU5 361 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 PSMA8Q8TAA3 256 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 PTPMT1Q8WUK0 201 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 TMEM170AQ8WVE7 144 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 ZFPM2Q8WW38 1151 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 LRRC59Q96AG4 307 aaKnown RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 ZC3HAV1LQ96H79 300 aaKnown RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 HES6Q96HZ4 224 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 ATP6V0BQ99437 205 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 TMEM47Q9BQJ4 181 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 TUBB2BQ9BVA1 445 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 TM2D2Q9BX73 214 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 FAM234AQ9H0X4 552 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 DENND2DQ9H6A0 471 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 ARL8BQ9NVJ2 186 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 CHCHD3Q9NX63 227 aaKnown RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 CWC15Q9P013 229 aaKnown RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 DDX25Q9UHL0 483 aaKnown RBP4.29□□□□□ -1.72
SCAF11-210ENST00000547654 FBXO4Q9UKT5 387 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 PLAGL1Q9UM63 463 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 ZNF148Q9UQR1 794 aa4.29□□□□□ -1.72
SCAF11-210ENST00000547654 GLI2P10070 1586 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 FAM237AA0A1B0GTK4 181 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 A0A1W2PRV1 198 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 LNP1A1A4G5 178 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 TARSL2A2RTX5 802 aaKnown RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 TYW5A2RUC4 315 aaKnown RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 CBY3A6NI87 242 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 CYSRT1A8MQ03 144 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 IFNL4K9M1U5 179 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 OGG1O15527 345 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 KIF1CO43896 1103 aaKnown RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 DDAH2O95865 285 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 BCL10O95999 233 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 TOMM40O96008 361 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 ENO1P06733 434 aaKnown RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 CTSAP10619 480 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 VPREB1P12018 145 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 ANXA7P20073 488 aaKnown RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 RFC1P35251 1148 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-210ENST00000547654 CD86P42081 329 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 CLCN3P51790 818 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 IL1RL1Q01638 556 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 RHAGQ02094 409 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 GALNT3Q14435 633 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 SHBQ15464 509 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 MEP1BQ16820 701 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 ANKRD20A4Q4UJ75 823 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 ANKRD20A8PQ5CZ79 823 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 ZRANB3Q5FWF4 1079 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 ANKRD20A2Q5SQ80 823 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 C6orf163Q5TEZ5 329 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 ANKRD20A1Q5TYW2 823 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 ASPHD1Q5U4P2 390 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 ANKRD20A3Q5VUR7 823 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 DAB2IPQ5VWQ8 1189 aa4.28□□□□□ -1.72
SCAF11-210ENST00000547654 PMS2CLQ68D20 193 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms