RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CRIPAKQ8N1N5 446 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 FBXW8Q8N3Y1 598 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 C2orf15Q8WU43 125 aaKnown RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 TWIST2Q8WVJ9 160 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 C19orf60Q96EN9 201 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 ZFYVE19Q96K21 471 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 CNDP1Q96KN2 507 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 TRIB3Q96RU7 358 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 YY1AP1Q9H869 796 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 MRM3Q9HC36 420 aaKnown RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 ANGPTL2Q9UKU9 493 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 ANGPTL3Q9Y5C1 460 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 CCNT2O60583 730 aaKnown RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 H2AFYO75367 372 aaKnown RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 SLC25A14O95258 325 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 F11P03951 625 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 IMPDH1P20839 514 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 ZNF140P52738 457 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 CLCQ05315 142 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 CBLBQ13191 982 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 CEACAM7Q14002 265 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 BOP1Q14137 746 aaKnown RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 TEAD2Q15562 447 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 TBCCQ15814 346 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.63□□□□□ -0.391e-8■■■■■ 174
SCAF11-209ENST00000547018 ELMOD1Q8N336 334 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 CDC26Q8NHZ8 85 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 STAG3L4Q8TBR4 150 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 ADAMTS19Q8TE59 1207 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 LPGAT1Q92604 370 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 VWCEQ96DN2 955 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 NLE1Q9NVX2 485 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 ADAMTS6Q9UKP5 1117 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 TBX21Q9UL17 535 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 ZNF711Q9Y462 761 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 AZIN1O14977 448 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 LMNAP02545 664 aaKnown RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 MT-ND1P03886 318 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 PYGLP06737 847 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 NELFEP18615 380 aaKnown RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 AKT1P31749 480 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 HNF1BP35680 557 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 HSPA7P48741 367 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 RAB33AQ14088 237 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 CHRNA6Q15825 494 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 AAK1Q2M2I8 961 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 TMEM154Q6P9G4 183 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 DNAJC14Q6Y2X3 702 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 LMNTD2Q8IXW0 634 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 DNAJB14Q8TBM8 379 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 MAGEC3Q8TD91 643 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 ASAH2Q9NR71 780 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 STX18Q9P2W9 335 aaKnown RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 AURKCQ9UQB9 309 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 ANKRD36A6QL64 1941 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 GRXCR1A8MXD5 290 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 E7ENX8 843 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 F8W8V4 182 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 CAPN15O75808 1086 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 PAPSS2O95340 614 aaPredicted RBP12.62□□□□□ -0.39
SCAF11-209ENST00000547018 FDXRP22570 491 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 HERVK_113P63132 956 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 ARHGEF7Q14155 803 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 TPGS2Q68CL5 300 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 ANKS6Q68DC2 871 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 SETD3Q86TU7 594 aaPredicted RBP12.62□□□□□ -0.39
SCAF11-209ENST00000547018 CHST14Q8NCH0 376 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 LKAAEAR1Q8TD35 194 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 SCAMP4Q969E2 229 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 PYCR2Q96C36 320 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 ZNF333Q96JL9 665 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 ZFRQ96KR1 1074 aaKnown RBP12.62□□□□□ -0.39
SCAF11-209ENST00000547018 ERVK-6Q9BXR3 956 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
SCAF11-209ENST00000547018 IL21Q9HBE4 155 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 LHX3Q9UBR4 397 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 VTI1BQ9UEU0 232 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 PRSS21Q9Y6M0 314 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 SPEGQ15772 3267 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 CAPN8A6NHC0 703 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 LEFTY2O00292 366 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 MRASO14807 208 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 CXCL10P02778 98 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 CYBBP04839 570 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 MTHFD2P13995 350 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 LAG3P18627 525 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 ITIH5Q86UX2 942 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 SLC22A9Q8IVM8 553 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 ICA1LQ8NDH6 482 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 GDPD5Q8WTR4 605 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 NOL11Q9H8H0 719 aaKnown RBP12.62□□□□□ -0.39
SCAF11-209ENST00000547018 SYTL2Q9HCH5 934 aa12.62□□□□□ -0.39
SCAF11-209ENST00000547018 INTS6Q9UL03 887 aaKnown RBP12.62□□□□□ -0.39
SCAF11-209ENST00000547018 TRAV19A0A0A6YYK7 116 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 MNX1P50219 401 aaPredicted RBP12.61□□□□□ -0.39
SCAF11-209ENST00000547018 RAP1GDS1P52306 607 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 PSME3P61289 254 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 NRF1Q16656 503 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 ANKRD33Q7Z3H0 272 aa12.61□□□□□ -0.39
SCAF11-209ENST00000547018 CLHC1Q8NHS4 586 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms