RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 XYLBO75191 536 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 TULP3O75386 442 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 DNAJC8O75937 253 aaPredicted RBP11.87□□□□□ -0.51
CCDC38-202ENST00000546386 SLC25A14O95258 325 aaPredicted RBP11.87□□□□□ -0.51
CCDC38-202ENST00000546386 TGDSO95455 350 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 IGSF6O95976 241 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 TCN1P20061 433 aaPredicted RBP11.87□□□□□ -0.51
CCDC38-202ENST00000546386 GRK2P25098 689 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 HMGCLP35914 325 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 RFTN1Q14699 578 aaPredicted RBP11.87□□□□□ -0.51
CCDC38-202ENST00000546386 ZNF77Q15935 545 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 PRSS36Q5K4E3 855 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 PTRHD1Q6GMV3 140 aaKnown RBP11.87□□□□□ -0.51
CCDC38-202ENST00000546386 LAYNQ6UX15 382 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 SERPINA13PQ6UXR4 307 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 LILRA3Q8N6C8 439 aaPredicted RBP11.87□□□□□ -0.51
CCDC38-202ENST00000546386 PTCD3Q96EY7 689 aaKnown RBP11.87□□□□□ -0.51
CCDC38-202ENST00000546386 BRD9Q9H8M2 597 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 SSX2IPQ9Y2D8 614 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 A0A1W2PQ67 120 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 STX16-NPEPL1H3BU86 382 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 CFLARO15519 480 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 CYP17A1P05093 508 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 MTHFD2P13995 350 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 POLR2EP19388 210 aaKnown RBP11.87□□□□□ -0.51
CCDC38-202ENST00000546386 FDXRP22570 491 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 SERPINA4P29622 427 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 HSPA14Q0VDF9 509 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 DENND4CQ5VZ89 1909 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 SEL1L3Q68CR1 1132 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 KLC3Q6P597 504 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 AFTPHQ6ULP2 937 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 FRMD7Q6ZUT3 714 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 FAM13CQ8NE31 585 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 CFAP61Q8NHU2 1237 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 ACDQ96AP0 544 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 PPP1R2P1Q96PQ5 205 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 LENG8Q96PV6 779 aaPredicted RBP11.87□□□□□ -0.51
CCDC38-202ENST00000546386 DRC3Q9H069 523 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 SUV39H2Q9H5I1 410 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 MID1IP1Q9NPA3 183 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 TCF7L2Q9NQB0 619 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 TXLNGQ9NUQ3 528 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 TAS2R13Q9NYV9 303 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 CRLS1Q9UJA2 301 aa11.87□□□□□ -0.51
CCDC38-202ENST00000546386 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.87□□□□□ -0.51
CCDC38-202ENST00000546386 ECI2O75521 394 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 LINC00032P0C843 101 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 EEF1DP29692 281 aaKnown RBP11.86□□□□□ -0.51
CCDC38-202ENST00000546386 MNAT1P51948 309 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 HK3P52790 923 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 SNRPD1P62314 119 aaKnown RBP11.86□□□□□ -0.51
CCDC38-202ENST00000546386 ACVR1Q04771 509 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 NFATC2Q13469 925 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 AAK1Q2M2I8 961 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 KIAA0408Q6ZU52 694 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 CUZD1Q86UP6 607 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 NPAS3Q8IXF0 933 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 CNPY4Q8N129 248 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 GBP7Q8N8V2 638 aaPredicted RBP11.86□□□□□ -0.51
CCDC38-202ENST00000546386 OR6Y1Q8NGX8 325 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 AGAP11Q8TF27 550 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 FATE1Q969F0 183 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 PBXIP1Q96AQ6 731 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 MCUR1Q96AQ8 359 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 CEP295NLQ96MC4 621 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 CCDC106Q9BWC9 280 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 PLA2G2FQ9BZM2 168 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 DENND2DQ9H6A0 471 aaPredicted RBP11.86□□□□□ -0.51
CCDC38-202ENST00000546386 ZMYM5Q9UJ78 669 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 SLC25A13Q9UJS0 675 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 ADAMTS6Q9UKP5 1117 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 PRKAB1Q9Y478 270 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 GLYATL1P3A0A0U1RQE8 302 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 CAPN14A8MX76 684 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 ATP6V1G2O95670 118 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 PKMP14618 531 aaKnown RBP11.86□□□□□ -0.51
CCDC38-202ENST00000546386 ATP5F1P24539 256 aaPredicted RBP11.86□□□□□ -0.51
CCDC38-202ENST00000546386 CREMQ03060 361 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 SULT2A1Q06520 285 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 KHDC1Q4VXA5 237 aaKnown RBP11.86□□□□□ -0.51
CCDC38-202ENST00000546386 FAM45BPQ6NSW5 357 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 DDIASQ8IXT1 998 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 TEX9Q8N6V9 391 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 KDM1BQ8NB78 822 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 FAM156AQ8NDB6 213 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 FAM45AQ8TCE6 357 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 CD200R1Q8TD46 325 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 SCG3Q8WXD2 468 aaKnown RBP11.86□□□□□ -0.51
CCDC38-202ENST00000546386 SAMD11Q96NU1 681 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 SLC28A3Q9HAS3 691 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 LATS2Q9NRM7 1088 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCDC38-202ENST00000546386 CACNA2D2Q9NY47 1150 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 TRMT6Q9UJA5 497 aaKnown RBP11.86□□□□□ -0.51
CCDC38-202ENST00000546386 ANKRD6Q9Y2G4 727 aa11.86□□□□□ -0.51
CCDC38-202ENST00000546386 ARIH1Q9Y4X5 557 aaPredicted RBP11.86□□□□□ -0.51
CCDC38-202ENST00000546386 A0A087X1B8 175 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 TMEM202A6NGA9 273 aa11.85□□□□□ -0.51
CCDC38-202ENST00000546386 MATN2O00339 956 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms