RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.64□□□□□ -0.23
VPS33A-208ENST00000543633 MPP6Q9NZW5 540 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 UXTQ9UBK9 157 aaPredicted RBP13.64□□□□□ -0.23
VPS33A-208ENST00000543633 CPA4Q9UI42 421 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 GNPTGQ9UJJ9 305 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 SLC30A1Q9Y6M5 507 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 ZFC3H1O60293 1989 aaKnown RBP13.64□□□□□ -0.23
VPS33A-208ENST00000543633 TDRD15B5MCY1 1934 aaKnown RBP13.64□□□□□ -0.23
VPS33A-208ENST00000543633 ASPDHA6ND91 283 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 CCDC154A6NI56 674 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 IFRD1O00458 451 aaPredicted RBP13.64□□□□□ -0.23
VPS33A-208ENST00000543633 TPST1O60507 370 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 SIX3O95343 332 aaPredicted RBP13.64□□□□□ -0.23
VPS33A-208ENST00000543633 ALBP02768 609 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 EEF1DP29692 281 aaKnown RBP13.64□□□□□ -0.23
VPS33A-208ENST00000543633 MAGEA8P43361 318 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 SCNN1BP51168 640 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 SCNN1GP51170 649 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 ERVK-8P63133 956 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 ITKQ08881 620 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 SLC10A7Q0GE19 358 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 EPS8Q12929 822 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 AARS2Q5JTZ9 985 aaKnown RBP13.64□□□□□ -0.23
VPS33A-208ENST00000543633 RBM48Q5RL73 367 aaKnown RBP13.64□□□□□ -0.23
VPS33A-208ENST00000543633 EXT2Q93063 718 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 NRBF2Q96F24 287 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 HHIPL1Q96JK4 782 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 COX4I2Q96KJ9 171 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 TMEM209Q96SK2 561 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 LRRC3Q9BY71 257 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 RIC8BQ9NVN3 520 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 SUN2Q9UH99 717 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 PCDHB3Q9Y5E6 796 aa13.64□□□□□ -0.23
VPS33A-208ENST00000543633 CASTOR2A6NHX0 329 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 SUPT3HB4E1H0 165 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 DEAF1O75398 565 aaPredicted RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 SUPT3HO75486 399 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 CRCPO75575 148 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 SLC22A3O75751 556 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 ESRRBO95718 433 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 SLC4A1P02730 911 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 LINC00032P0C843 101 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 CD9P21926 228 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 PSMA3P25788 255 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 PBX3P40426 434 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 TAF1CQ15572 869 aaPredicted RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 PARP15Q460N3 678 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 GPR107Q5VW38 600 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 OVOS1Q6IE37 1185 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 C17orf99Q6UX52 265 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 AGMOQ6ZNB7 445 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 SPATA2LQ8IUW3 424 aaPredicted RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 RIMKLAQ8IXN7 391 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 SFRP1Q8N474 314 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 BRSK1Q8TDC3 778 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 ISG20Q96AZ6 181 aaKnown RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 TBATAQ96M53 351 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 ZIC5Q96T25 663 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 DCUN1D5Q9BTE7 237 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 TDRD1Q9BXT4 1180 aaKnown RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 TAS2R13Q9NYV9 303 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 IFT80Q9P2H3 777 aaPredicted RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 RNF112Q9ULX5 631 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 ST3GAL5Q9UNP4 418 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 B3GNT3Q9Y2A9 372 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 CRYL1Q9Y2S2 319 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 HEMK1Q9Y5R4 338 aaPredicted RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 PTGDR2Q9Y5Y4 395 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 PCNTO95613 3336 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 CCDC162PA2VCL2 907 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 TMEM88BA6NKF7 163 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 H3BMM5 538 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 J3KR12 359 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 SNX2O60749 519 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 SOAT2O75908 522 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 DNAJB5O75953 348 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 SEC14L2O76054 403 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 BAIAP3O94812 1187 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 MOCS2O96007 188 aaPredicted RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 RPLP2P05387 115 aaKnown RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 MBL2P11226 248 aaPredicted RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 CHRM3P20309 590 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 ALDH3A2P51648 485 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 POLR2JP52435 117 aaKnown RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 MAXP61244 160 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 RAD51Q06609 339 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 BROXQ5VW32 411 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 ALG1LQ6GMV1 187 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 TMEM26Q6ZUK4 368 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 LDB1Q86U70 411 aaPredicted RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 TRIM74Q86UV6 250 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 TRIM73Q86UV7 250 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 GALNT13Q8IUC8 556 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 NKAPQ8N5F7 415 aaKnown RBP13.63□□□□□ -0.23
VPS33A-208ENST00000543633 ATP6V0D2Q8N8Y2 350 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 DDHD1Q8NEL9 900 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 OR10T2Q8NGX3 314 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 OR4L1Q8NH43 312 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 RAB2BQ8WUD1 216 aa13.63□□□□□ -0.23
VPS33A-208ENST00000543633 NSUN5Q96P11 429 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms