RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TRPC4APQ8TEL6 797 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 EDAQ92838 391 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 IGSF8Q969P0 613 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 FBXL8Q96CD0 374 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 P2RY11Q96G91 374 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC41A2Q96JW4 573 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 Q96MF0 132 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 SLITRK1Q96PX8 696 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 SPXQ9BT56 116 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 UTP14AQ9BVJ6 771 aaKnown RBP3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC5A7Q9GZV3 580 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 SPATC1LQ9H0A9 340 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 DNAJC18Q9H819 358 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 ACTR5Q9H9F9 607 aaPredicted RBP3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 PAPOLBQ9NRJ5 636 aaKnown RBP3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 DNAJB4Q9UDY4 337 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 HACL1Q9UJ83 578 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 LEF1Q9UJU2 399 aaPredicted RBP3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 BLOC1S6Q9UL45 172 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 CDH7Q9ULB5 785 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 NFS1Q9Y697 457 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 NLRP1Q9C000 1473 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 PLXNC1O60486 1568 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 IQGAP1P46940 1657 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 CLTCQ00610 1675 aaKnown RBP3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 FGD6Q6ZV73 1430 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 ATP7AQ04656 1500 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 UGGT1Q9NYU2 1555 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 PZPP20742 1482 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 A0A087WV48 116 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 CYP2D7A0A087X1C5 515 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 A0A096LPK6 155 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 A0A0U1RQF3 1178 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 DDTLA6NHG4 134 aaPredicted RBP3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 LINC00473A8K010 186 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 AKR1B15C9JRZ8 316 aaPredicted RBP3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 RRHO14718 337 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 IFIT3O14879 490 aaKnown RBP3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 ATP2A1O14983 1001 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 CLIC2O15247 247 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 KLK8O60259 260 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 TMCC1O94876 653 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 NFATC1O95644 943 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 EGR2P11161 476 aaPredicted RBP3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 ST6GAL1P15907 406 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 PFKFB1P16118 471 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 PRLRP16471 622 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 SRD5A1P18405 259 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 ACRV1P26436 265 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 PCGF2P35227 344 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 PRCPP42785 496 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 CDH13P55290 713 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 POLR2FP61218 127 aaKnown RBP3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 ARF5P84085 180 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 MZT1Q08AG7 82 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 NAE1Q13564 534 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 TIGD2Q4W5G0 525 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC39A12Q504Y0 691 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 AWAT1Q58HT5 328 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 KIAA1755Q5JYT7 1200 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 SFMBT2Q5VUG0 894 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 UNC5DQ6UXZ4 953 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 SPATA21Q7Z572 469 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 LDB1Q86U70 411 aaPredicted RBP3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 CEP57Q86XR8 500 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 NHLRC2Q8NBF2 726 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 GRAPLQ8TC17 118 aaPredicted RBP3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 PIGKQ92643 395 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 KAT2BQ92831 832 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 RNF183Q96D59 192 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 DAZAP1Q96EP5 407 aaKnown RBP3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 HES6Q96HZ4 224 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 CCDC17Q96LX7 622 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 TSGA13Q96PP4 275 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 ADOQ96SZ5 270 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 EGFL8Q99944 293 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 MACROD1Q9BQ69 325 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 FAM110AQ9BQ89 295 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 ABHD6Q9BV23 337 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 SCNM1Q9BWG6 230 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 C1orf21Q9H246 121 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 KCNK15Q9H427 330 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 NOL11Q9H8H0 719 aaKnown RBP3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 ZNF304Q9HCX3 659 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 AURKAIP1Q9NWT8 199 aaPredicted RBP3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 CNIH4Q9P003 139 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 SEPT10Q9P0V9 454 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 TESMINQ9Y4I5 508 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 CLIC4Q9Y696 253 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 A3GALT2U3KPV4 340 aa3.95□□□□□ -1.78
SFSWAP-211ENST00000542813 ROBO1Q9Y6N7 1651 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 A2MP01023 1474 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 TMEM94Q12767 1356 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 CENPVL1A0A0U1RR11 272 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 WIPF3A6NGB9 483 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 OOEPA6NGQ2 149 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 CGB1A6NKQ9 187 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 BTBD19C9JJ37 291 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC33A1O00400 549 aaPredicted RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 RNMTO43148 476 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms