RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PRAMEF19Q5SWL8 479 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 POTEHQ6S545 545 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 SPATA6LQ8N4H0 392 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 DNAJA4Q8WW22 397 aaPredicted RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 CKAP2Q8WWK9 683 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 RCN3Q96D15 328 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 FEM1CQ96JP0 617 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 SLC38A3Q99624 504 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 HOPXQ9BPY8 73 aaPredicted RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 LRTM1Q9HBL6 345 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 PRH1P02810 166 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 AP1S1P61966 158 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 CBX3Q13185 183 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 CTBP1Q13363 440 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 ABCA11PQ4W5N1 156 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 RNF19BQ6ZMZ0 732 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 OR6K2Q8NGY2 324 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 RASSF5Q8WWW0 418 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 AIFM2Q9BRQ8 373 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 ANKZF1Q9H8Y5 726 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 PRPF19Q9UMS4 504 aaKnown RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 C2CD2Q9Y426 696 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 NEXMIFQ5QGS0 1516 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 TRBV23OR9-2A0A075B6M9 112 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 WNT10BO00744 389 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 TRAFD1O14545 582 aaPredicted RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 DHX15O43143 795 aaKnown RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 MAFO75444 373 aaPredicted RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 SPATA31D3P0C874 917 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 ANPEPP15144 967 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 TCEA1P23193 301 aaKnown RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 GLRA2P23416 452 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 LIPEQ05469 1076 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 FOXM1Q08050 763 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 SPATA31D4Q6ZUB0 917 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 ZNF567Q8N184 647 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 TNFAIP8L1Q8WVP5 186 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 SMG7Q92540 1137 aaKnown RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 EXOSC8Q96B26 276 aaKnown RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 IL1RAPQ9NPH3 570 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 PDP1Q9P0J1 537 aaPredicted RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 HMGXB4Q9UGU5 601 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 VWA7Q9Y334 891 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 HEBP2Q9Y5Z4 205 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 ZBTB22O15209 634 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 HNRNPLP14866 589 aaKnown RBP eCLIP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 ALDH4A1P30038 563 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 RPL22P35268 128 aaKnown RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 GRK6P43250 576 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 GALK1P51570 392 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 CACNG1Q06432 222 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 DPYSQ14117 519 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 GFOD2Q3B7J2 385 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 PARP15Q460N3 678 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 DCST1Q5T197 706 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 CATSPERGQ6ZRH7 1159 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 GPR142Q7Z601 462 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 MON1AQ86VX9 555 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 CYP2W1Q8TAV3 490 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 SLC38A4Q969I6 547 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 IL12RB2Q99665 862 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 ACO2Q99798 780 aaKnown RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 EBNA1BP2Q99848 306 aaKnown RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 TCF25Q9BQ70 676 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 C12orf4Q9NQ89 552 aa10.68□□□□□ -0.7
GABRB3-204ENST00000541819 NDRG2Q9UN36 371 aaKnown RBP10.68□□□□□ -0.7
GABRB3-204ENST00000541819 FADS2P1A8MWK0 482 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 PDCD5O14737 125 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 ZBTB11O95625 1053 aaPredicted RBP10.67□□□□□ -0.7
GABRB3-204ENST00000541819 CYP3A4P08684 503 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 SEC23AQ15436 765 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 TBC1D21Q8IYX1 336 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 FBXO15Q8NCQ5 510 aaPredicted RBP10.67□□□□□ -0.7
GABRB3-204ENST00000541819 RFKQ969G6 155 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 DUSP16Q9BY84 665 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 PRDM12Q9H4Q4 367 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 POLMQ9NP87 494 aaPredicted RBP10.67□□□□□ -0.7
GABRB3-204ENST00000541819 C8orf4Q9NR00 106 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 CDC42BPBQ9Y5S2 1711 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 PREX2Q70Z35 1606 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 ADGRB3O60242 1522 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 QRICH2Q9H0J4 1663 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 INO80Q9ULG1 1556 aaPredicted RBP10.67□□□□□ -0.7
GABRB3-204ENST00000541819 SMCO3A2RU48 225 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 ANXA2P2A6NMY6 339 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 MPZL2O60487 215 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 ANXA2P07355 339 aaKnown RBP10.67□□□□□ -0.7
GABRB3-204ENST00000541819 FAM153BP0C7A2 387 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 MATKP42679 507 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 SEC13P55735 322 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 MED27Q6P2C8 311 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 PLPPR4Q7Z2D5 763 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 DGLUCYQ7Z3D6 616 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 ADGRG6Q86SQ4 1221 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 GPR152Q8TDT2 470 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 RBM18Q96H35 190 aaKnown RBP10.67□□□□□ -0.7
GABRB3-204ENST00000541819 RIPOR3Q96MK2 946 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 ATXN10Q9UBB4 475 aa10.67□□□□□ -0.7
GABRB3-204ENST00000541819 FBXO5Q9UKT4 447 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms