RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 MARSP56192 900 aaKnown RBP9.32□□□□□ -0.92
YBX3-211ENST00000541351 KCNK10P57789 538 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 GCNT1Q02742 428 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 BCL2L1Q07817 233 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 Q0VFX4 171 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 RALGDSQ12967 914 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 PAK1Q13153 545 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 AIMP2Q13155 320 aaKnown RBP9.32□□□□□ -0.92
YBX3-211ENST00000541351 CYP2A13Q16696 494 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 TMCO4Q5TGY1 634 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 MRGPREQ86SM8 312 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 ZNF397Q8NF99 534 aaPredicted RBP9.32□□□□□ -0.92
YBX3-211ENST00000541351 DNAJB8Q8NHS0 232 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 EPS8L1Q8TE68 723 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 NR4A3Q92570 626 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 VOPP1Q96AW1 172 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 CLIP3Q96DZ5 547 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 DTD2Q96FN9 168 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 VPS50Q96JG6 964 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 MAGEB10Q96LZ2 347 aaPredicted RBP9.32□□□□□ -0.92
YBX3-211ENST00000541351 COQ10AQ96MF6 247 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 NPY6RQ99463 290 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 MLPHQ9BV36 600 aaPredicted RBP9.32□□□□□ -0.92
YBX3-211ENST00000541351 SLC7A5P2Q9GIP4 190 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 RAB33BQ9H082 229 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 RMI1Q9H9A7 625 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 AKIRIN1Q9H9L7 192 aaPredicted RBP9.32□□□□□ -0.92
YBX3-211ENST00000541351 TMEM248Q9NWD8 314 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 STMN3Q9NZ72 180 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 TNFRSF10DQ9UBN6 386 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 DNAI1Q9UI46 699 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 KIAA1324LA8MWY0 1029 aaPredicted RBP9.31□□□□□ -0.92
YBX3-211ENST00000541351 SNX2O60749 519 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 LETM1O95202 739 aaPredicted RBP9.31□□□□□ -0.92
YBX3-211ENST00000541351 ASMTLO95671 621 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 CRYABP02511 175 aaKnown RBP9.31□□□□□ -0.92
YBX3-211ENST00000541351 MYBL2P10244 700 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 CYP2A6P11509 494 aaPredicted RBP9.31□□□□□ -0.92
YBX3-211ENST00000541351 KRT5P13647 590 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 XRCC1P18887 633 aaPredicted RBP9.31□□□□□ -0.92
YBX3-211ENST00000541351 KIR3DL1P43629 444 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 CSNK1DP48730 415 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 YBEYP58557 167 aaPredicted RBP9.31□□□□□ -0.92
YBX3-211ENST00000541351 HSD11B2P80365 405 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 SLC6A3Q01959 620 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 NRG1Q02297 640 aaPredicted RBP9.31□□□□□ -0.92
YBX3-211ENST00000541351 DPTQ07507 201 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 ADCY2Q08462 1091 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 GPS2Q13227 327 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 NCF4Q15080 339 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 SLC25A52Q3SY17 297 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 CBWD6Q4V339 395 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 CBWD3Q5JTY5 395 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 CBWD5Q5RIA9 395 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 DENND1BQ6P3S1 775 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 CLEC9AQ6UXN8 241 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 LEKR1Q6ZMV7 388 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 FAM92BQ6ZTR7 304 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 MARK2Q7KZI7 788 aaKnown RBP9.31□□□□□ -0.92
YBX3-211ENST00000541351 CHST15Q7LFX5 561 aaPredicted RBP9.31□□□□□ -0.92
YBX3-211ENST00000541351 TECPR1Q7Z6L1 1165 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 DSELQ8IZU8 1212 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 SLC41A2Q96JW4 573 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 C18orf12Q96KH6 178 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 SPATA32Q96LK8 384 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 ALPK1Q96QP1 1244 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 CD180Q99467 661 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 ZNF559Q9BR84 538 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 UPF2Q9HAU5 1272 aaKnown RBP9.31□□□□□ -0.92
YBX3-211ENST00000541351 PLCB1Q9NQ66 1216 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 SEMA3GQ9NS98 782 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 VPS18Q9P253 973 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 UBA2Q9UBT2 640 aaPredicted RBP9.31□□□□□ -0.92
YBX3-211ENST00000541351 TBC1D29Q9UFV1 150 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 OR12D3Q9UGF7 316 aa9.31□□□□□ -0.92
YBX3-211ENST00000541351 PRRC2AP48634 2157 aaKnown RBP9.3□□□□□ -0.92
YBX3-211ENST00000541351 RNF225M0QZC1 329 aaPredicted RBP9.3□□□□□ -0.92
YBX3-211ENST00000541351 SLC16A3O15427 465 aaKnown RBP9.3□□□□□ -0.92
YBX3-211ENST00000541351 INSIG1O15503 277 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 MAP3K7O43318 606 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 CUTAO60888 179 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 UNC5CO95185 931 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 ZWINTO95229 277 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 MLYCDO95822 493 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 HEXAP06865 529 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 HBQ1P09105 142 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 DNASE1P24855 282 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 CASP1P29466 404 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 GNA15P30679 374 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 ADRA1BP35368 520 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 YBX1P67809 324 aaKnown RBP9.3□□□□□ -0.92
YBX3-211ENST00000541351 PLCL1Q15111 1095 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 HIF1AQ16665 826 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 PARP15Q460N3 678 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 DUS1LQ6P1R4 473 aaKnown RBP9.3□□□□□ -0.92
YBX3-211ENST00000541351 IGFL2Q6UWQ7 119 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 ADAMTSL4Q6UY14 1074 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 PRIMA1Q86XR5 153 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 CAMK1DQ8IU85 385 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 CA5BP1Q8WTZ4 195 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms