RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 SPPL2AQ8TCT8 520 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 SEC14L1Q92503 715 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 SLCO2A1Q92959 643 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 CASD1Q96PB1 797 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 MTERF1Q99551 399 aaKnown RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 KCTD14Q9BQ13 255 aaPredicted RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 RIOK2Q9BVS4 552 aaKnown RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 SUV39H2Q9H5I1 410 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 MRPL40Q9NQ50 206 aaKnown RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 MARCH4Q9P2E8 410 aaPredicted RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 POLR3HQ9Y535 204 aaPredicted RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 LRRC14BA6NHZ5 514 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 H3BM21 787 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 NFATC1O95644 943 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 MTA1Q13330 715 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 EFL1Q7Z2Z2 1120 aaKnown RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 GDPD5Q8WTR4 605 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 HMGB4Q8WW32 186 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 CLSTN3Q9BQT9 956 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 KLHL25Q9H0H3 589 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 CDH19Q9H159 772 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 STX18Q9P2W9 335 aaKnown RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 NME7Q9Y5B8 376 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 RAD54BQ9Y620 910 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 GSAPA4D1B5 854 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 PITPNM1O00562 1244 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 ALDH1A2O94788 518 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 COX7A2P14406 83 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 PSMC3P17980 439 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 S100A3P33764 101 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 NAB1Q13506 487 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 LRRC26Q2I0M4 334 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 ZNF789Q5FWF6 425 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 MRPL10Q7Z7H8 261 aaKnown RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 ZC3HC1Q86WB0 502 aaKnown RBP9.49□□□□□ -0.89
TTC39C-203ENST00000540918 OR2AP1Q8NGE2 309 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 FERD3LQ96RJ6 166 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 TMEM175Q9BSA9 504 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 ZNF711Q9Y462 761 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 CENPFP49454 3210 aa9.49□□□□□ -0.89
TTC39C-203ENST00000540918 ZDBF2Q9HCK1 2354 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 CABIN1Q9Y6J0 2220 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 ILVBLA1L0T0 632 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 SMAD6O43541 496 aaKnown RBP9.48□□□□□ -0.89
TTC39C-203ENST00000540918 FSBPO95073 299 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 FSHRP23945 695 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 PSMA4P25789 261 aaKnown RBP9.48□□□□□ -0.89
TTC39C-203ENST00000540918 PIK3R1P27986 724 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 CD70P32970 193 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 CDKN1CP49918 316 aaPredicted RBP9.48□□□□□ -0.89
TTC39C-203ENST00000540918 SLC7A2P52569 658 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 MAPK10P53779 464 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 WDR5P61964 334 aaKnown RBP9.48□□□□□ -0.89
TTC39C-203ENST00000540918 HMGCS1Q01581 520 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 DMC1Q14565 340 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 UBXN2BQ14CS0 331 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 SLC9B1Q4ZJI4 515 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 LRRC66Q68CR7 880 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 CCDC81Q6ZN84 652 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 ZNF786Q8N393 782 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 TBC1D19Q8N5T2 526 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 RIN3Q8TB24 985 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 EEF1AKMT1Q8WVE0 214 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 KCNA7Q96RP8 456 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 SLC39A3Q9BRY0 314 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 FEM1AQ9BSK4 669 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 EBPLQ9BY08 206 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 DCLRE1BQ9H816 532 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 MTMR10Q9NXD2 777 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 ANKDD1BA6NHY2 528 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 TMEM114B3SHH9 223 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 WASH3PC4AMC7 463 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 H3BMM5 538 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 B4GALT3O60512 393 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 SIN3BO75182 1162 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 APODP05090 189 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 CAPN1P07384 714 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 ME2P23368 584 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 NEK2P51955 445 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 FBXW4P57775 412 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 LMAN2Q12907 356 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 KRT72Q14CN4 511 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 PLEKHG6Q3KR16 790 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 LSM12Q3MHD2 195 aaKnown RBP9.48□□□□□ -0.89
TTC39C-203ENST00000540918 ZBTB49Q6ZSB9 765 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 ADAMTSL2Q86TH1 951 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 HORMAD1Q86X24 394 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 CLYBLQ8N0X4 340 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 VPS33AQ96AX1 596 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 AARSD1Q9BTE6 412 aaKnown RBP9.48□□□□□ -0.89
TTC39C-203ENST00000540918 CRISPLD1Q9H336 500 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 CXXC1Q9P0U4 656 aaPredicted RBP9.48□□□□□ -0.89
TTC39C-203ENST00000540918 LGALS13Q9UHV8 139 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 GGA2Q9UJY4 613 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 INVSQ9Y283 1065 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 TMEM98Q9Y2Y6 226 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 U3KQV3 271 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 ATG2BQ96BY7 2078 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 UPK3BL1B0FP48 263 aa9.48□□□□□ -0.89
TTC39C-203ENST00000540918 UPK3BL2E5RIL1 263 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms