RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PTGER3P43115 390 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 SPINT3P49223 89 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 ADGRE1Q14246 886 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 CTC1Q2NKJ3 1217 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 ATP13A5Q4VNC0 1218 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 FNDC3BQ53EP0 1204 aaKnown RBP12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 FBXO48Q5FWF7 155 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 ATAT1Q5SQI0 421 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 TRIM67Q6ZTA4 783 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 Q7L0L9 218 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 CBARPQ8N350 705 aaPredicted RBP12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 CCNYL1Q8N7R7 359 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 TERB1Q8NA31 727 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 PIWIL2Q8TC59 973 aaKnown RBP12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 SCG3Q8WXD2 468 aaKnown RBP12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 SCAMP4Q969E2 229 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 PBXIP1Q96AQ6 731 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 PHF21BQ96EK2 531 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 ATOH8Q96SQ7 321 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 DRC3Q9H069 523 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 SARS2Q9NP81 518 aaKnown RBP12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 CLDND1Q9NY35 253 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 KCNK4Q9NYG8 393 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 TAS2R13Q9NYV9 303 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 ZDHHC2Q9UIJ5 367 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 MID2Q9UJV3 735 aa12.17□□□□□ -0.46
AP003559.1-201ENST00000540906 C16orf96A6NNT2 1141 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 AGAP14A8MT82 685 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 UPK3BL1B0FP48 263 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 TMEM233B4DJY2 109 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 UPK3BL2E5RIL1 263 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 CBX6O95503 412 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 HSPA4LO95757 839 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 JUNP05412 331 aaKnown RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 HNRNPLP14866 589 aaKnown RBP eCLIP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 TSPAN8P19075 237 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 ITGALP20701 1170 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 GDI1P31150 447 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 VIPR1P32241 457 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 NNMTP40261 264 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 SLC26A3P40879 764 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 IL12RB1P42701 662 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 PRKAA2P54646 552 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 ACTN3Q08043 901 aaPredicted RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 CCDC15Q0P6D6 951 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 RCN2Q14257 317 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 GRIN2CQ14957 1233 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 TSNQ15631 228 aaKnown RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 ZNF805Q5CZA5 627 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 AARS2Q5JTZ9 985 aaKnown RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 EGFLAMQ63HQ2 1017 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 BRAT1Q6PJG6 821 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 WDR75Q8IWA0 830 aaKnown RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 NXPE1Q8N323 547 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 EEF1AKMT1Q8WVE0 214 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 FAM129BQ96TA1 746 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 PLCD4Q9BRC7 762 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 OSBPL1AQ9BXW6 950 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 NMUR2Q9GZQ4 415 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 CDH19Q9H159 772 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 CCDC68Q9H2F9 335 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 THG1LQ9NWX6 298 aaKnown RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 NCKIPSDQ9NZQ3 722 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 ARMCX1Q9P291 453 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 CRLS1Q9UJA2 301 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 BRWD1Q9NSI6 2320 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 A0A1W2PPC1 479 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 MYO1CO00159 1063 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 FCHO1O14526 889 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 PRMT5O14744 637 aaPredicted RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 VPS26AO75436 327 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 ESR1P03372 595 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 RBP1P09455 135 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 ALOX15P16050 662 aaPredicted RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 HOXB8P17481 243 aaPredicted RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 PSMC3P17980 439 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 CHRM3P20309 590 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 ETV3P41162 512 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 IDH3AP50213 366 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 HK3P52790 923 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 ADARP55265 1226 aaKnown RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 DNAJB13P59910 316 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 HNRNPA1L2Q32P51 320 aaKnown RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 UNC50Q53HI1 259 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 ZNF648Q5T619 568 aaPredicted RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 KLC3Q6P597 504 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 Q6ZVL8 140 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 CLNKQ7Z7G1 428 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 PELI3Q8N2H9 469 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 EZH1Q92800 747 aaPredicted RBP12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 KCNJ9Q92806 393 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 MSLNLQ96KJ4 702 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 LRRC37BQ96QE4 947 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 DERL2Q9GZP9 239 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 TMEM245Q9H330 911 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 GSTO2Q9H4Y5 243 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 ARL8BQ9NVJ2 186 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 APPL1Q9UKG1 709 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 PLA2G4CQ9UP65 541 aa12.16□□□□□ -0.46
AP003559.1-201ENST00000540906 TICRRQ7Z2Z1 1910 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms