RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 COL11A1P12107 1806 aaPredicted RBP8.65□□□□□ -1.02
DDB1-217ENST00000540166 PCP4L1A6NKN8 68 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 SNTNA6NMZ2 147 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 TIMM44O43615 452 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 TSPAN1O60635 241 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 RFPL2O75678 378 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 MICAL2O94851 1124 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 SOD2P04179 222 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 MPOP05164 745 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 CHRNGP07510 517 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 CTSAP10619 480 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 ODC1P11926 461 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 RPL17P18621 184 aaKnown RBP8.65□□□□□ -1.03
DDB1-217ENST00000540166 FSHRP23945 695 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 PTGS2P35354 604 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 IL12RB1P42701 662 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 HARS2P49590 506 aaKnown RBP8.65□□□□□ -1.03
DDB1-217ENST00000540166 HYAL1Q12794 435 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 PITRM1Q5JRX3 1037 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 TTC23Q5W5X9 447 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 ZCCHC8Q6NZY4 707 aaKnown RBP8.65□□□□□ -1.03
DDB1-217ENST00000540166 PIWIL3Q7Z3Z3 882 aaKnown RBP8.65□□□□□ -1.03
DDB1-217ENST00000540166 SLC39A11Q8N1S5 342 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 ATP6V0D2Q8N8Y2 350 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 OR6B3Q8NGW1 331 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 DMRTB1Q96MA1 342 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 CDK5RAP1Q96SZ6 601 aaKnown RBP8.65□□□□□ -1.03
DDB1-217ENST00000540166 PRRX2Q99811 253 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 OR2B2Q9GZK3 357 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 C12orf4Q9NQ89 552 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 THG1LQ9NWX6 298 aaKnown RBP8.65□□□□□ -1.03
DDB1-217ENST00000540166 KLHL8Q9P2G9 620 aaPredicted RBP8.65□□□□□ -1.03
DDB1-217ENST00000540166 MUTYHQ9UIF7 546 aa8.65□□□□□ -1.03
DDB1-217ENST00000540166 A0A1W2PQ72 361 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 NRP2O60462 931 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 ZNF623O75123 536 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 CXCL8P10145 99 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 L1CAMP32004 1257 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 GNL1P36915 607 aaPredicted RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 ST13P50502 369 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 CLCQ05315 142 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 FUT11Q495W5 492 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.64□□□□□ -1.03
DDB1-217ENST00000540166 SH3PXD2AQ5TCZ1 1133 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 PRR23BQ6ZRT6 265 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 TAS1R3Q7RTX0 852 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 SPRED2Q7Z698 418 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 OR8H2Q8N162 312 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 SPERTQ8NA61 448 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 SLC7A14Q8TBB6 771 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 MRPS31Q92665 395 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 ZHX1-C8orf76Q96EF9 292 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 TMEM176AQ96HP8 235 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 ASAH2Q9NR71 780 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 ANAPC2Q9UJX6 822 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 WBP11Q9Y2W2 641 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 GRXCR2A6NFK2 248 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 SAGE2PA6NJ88 616 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 ERBB2P04626 1255 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 AVPR1AP37288 418 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 HLCSP50747 726 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 HK2P52789 917 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 MGAT3Q09327 533 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 KCNJ11Q14654 390 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 C15orf39Q6ZRI6 1047 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 NUDT18Q6ZVK8 323 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 DSG4Q86SJ6 1040 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 DCP2Q8IU60 420 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 NAT16Q8N8M0 369 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 GIPC2Q8TF65 315 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 MED30Q96HR3 178 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 ZNF778Q96MU6 729 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 CPNE1Q99829 537 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 TDRD1Q9BXT4 1180 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 ADAMTS10Q9H324 1103 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 ATXN3LQ9H3M9 355 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 ZBTB26Q9HCK0 441 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 IARS2Q9NSE4 1012 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 WDR70Q9NW82 654 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 SLC17A6Q9P2U8 582 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 IPO11Q9UI26 975 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 MYH9P35579 1960 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 ZNF646O15015 1829 aaPredicted RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 EPOPA6NHQ4 379 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 FAM159BA6NKW6 160 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 H0Y858 1186 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 MSI1O43347 362 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 MBTPS2O43462 519 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 MT-ND1P03886 318 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 PTPN2P17706 415 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 PTPN7P35236 360 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 SERPINH1P50454 418 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 TUBB3Q13509 450 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 LIPMQ5VYY2 423 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 ANKRD54Q6NXT1 300 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 RFPL4BQ6ZWI9 263 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 BNIPLQ7Z465 357 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 THAP5Q7Z6K1 395 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 GALNT12Q8IXK2 581 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 TCAIMQ8N3R3 496 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms