RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 SFT2D3Q587I9 215 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 MARCH8Q5T0T0 291 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 AADACL2Q6P093 401 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 BEND5Q7L4P6 421 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 SVOPLQ8N434 492 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TRPV1Q8NER1 839 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ACTL9Q8TC94 416 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 RNF157Q96PX1 679 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 KCTD14Q9BQ13 255 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 FICDQ9BVA6 458 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 GON7Q9BXV9 100 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TTYH1Q9H313 450 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TP63Q9H3D4 680 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 GPN1Q9HCN4 374 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ZDHHC7Q9NXF8 308 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 SLC39A1Q9NY26 324 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 RDH8Q9NYR8 311 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ZMAT5Q9UDW3 170 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 PSME2Q9UL46 239 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 DNPEPQ9ULA0 475 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 VANGL2Q9ULK5 521 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 FARP1Q9Y4F1 1045 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ASB3Q9Y575 518 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 C3orf70A6NLC5 250 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 AQP12BA6NM10 295 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 H3BM21 787 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ZNF197O14709 1029 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 PPM1BO75688 479 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 PIAS1O75925 651 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 MT-CO1P00395 513 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 IMPDH1P20839 514 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CDH6P55285 790 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 SMIM11AP58511 58 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 MPP1Q00013 466 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TAF1CQ15572 869 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CYP2A13Q16696 494 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ANKRD26P1Q6NSI1 321 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CYS1Q717R9 158 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 AQP12AQ8IXF9 295 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 SPARTQ8N0X7 666 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 LILRB4Q8NHJ6 448 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CENPIQ92674 756 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ACSS3Q9H6R3 686 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CD93Q9NPY3 652 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CFL2Q9Y281 166 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TTLL8A6PVC2 850 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ATP6V1G2-DDX39BF2Z307 99 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 H3BUI4 141 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 NR5A2O00482 541 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 GPR182O15218 404 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 NUPL2O15504 423 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ITM2AO43736 263 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CDC40O60508 579 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SERPINA1P01009 418 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PCSK1P29120 753 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 GRIA3P42263 894 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 STARP49675 285 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PGDP52209 483 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 AP2S1P53680 142 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 MAZP56270 477 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 KCNJ8Q15842 424 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 DPYSL2Q16555 572 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF181Q2M3W8 571 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 AGKQ53H12 422 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PYHIN1Q6K0P9 492 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 TICAM1Q8IUC6 712 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 MIER2Q8N344 545 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SYNPOQ8N3V7 929 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 MARVELD2Q8N4S9 558 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 OR6B3Q8NGW1 331 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 RXFP2Q8WXD0 754 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 JPH3Q8WXH2 748 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PWWP2AQ96N64 755 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SRPK1Q96SB4 655 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 MCUBQ9NWR8 336 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 DNAJC28Q9NX36 388 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 NUDT5Q9UKK9 219 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 RUVBL2Q9Y230 463 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 FNDC3AQ9Y2H6 1198 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SNX9Q9Y5X1 595 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 DYNC1LI2O43237 492 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ARHGEF15O94989 841 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CELF2O95319 508 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 TRAPPC2P0DI81 140 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 TRAPPC2BP0DI82 140 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 RBP3P10745 1247 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 COL6A2P12110 1019 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 COX4I1P13073 169 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 RPL17P18621 184 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 HCAR3P49019 387 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PEX6Q13608 980 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PAOXQ6QHF9 649 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SETD6Q8TBK2 473 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SLC35F5Q8WV83 523 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CPB2Q96IY4 423 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SNX18Q96RF0 628 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PRKD2Q9BZL6 878 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 AAASQ9NRG9 546 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 RAB6BQ9NRW1 208 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 IFT80Q9P2H3 777 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms