RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 HDAC11Q96DB2 347 aa14.86□□□□□ -0.03
USB1-203ENST00000539737 APMAPQ9HDC9 416 aa14.86□□□□□ -0.03
USB1-203ENST00000539737 SLC39A1Q9NY26 324 aa14.86□□□□□ -0.03
USB1-203ENST00000539737 DTLQ9NZJ0 730 aa14.86□□□□□ -0.03
USB1-203ENST00000539737 CD84Q9UIB8 345 aa14.86□□□□□ -0.03
USB1-203ENST00000539737 AMFRQ9UKV5 643 aa14.86□□□□□ -0.03
USB1-203ENST00000539737 TMEM98Q9Y2Y6 226 aa14.86□□□□□ -0.03
USB1-203ENST00000539737 PCDHA3Q9Y5H8 950 aa14.86□□□□□ -0.03
USB1-203ENST00000539737 hCG_1818297A0A087WSY0 165 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 BLACEA4D250 179 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 CFAP69A5D8W1 941 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 PPP1R12AO14974 1030 aaPredicted RBP14.85□□□□□ -0.03
USB1-203ENST00000539737 PEX11BO96011 259 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 PNLIPP16233 465 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 LHCGRP22888 699 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 KELP23276 732 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 CCNCP24863 283 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 TRIM23P36406 574 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 CETN2P41208 172 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 MMP13P45452 471 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 PPM1FP49593 454 aaPredicted RBP14.85□□□□□ -0.03
USB1-203ENST00000539737 LIMK2P53671 638 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 RWDD2BP57060 319 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 SLC10A7Q0GE19 358 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 PDK1Q15118 436 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 MARC1Q5VT66 337 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 ZNF662Q6ZS27 426 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 TIPARPQ7Z3E1 657 aaKnown RBP14.85□□□□□ -0.03
USB1-203ENST00000539737 ZNF438Q7Z4V0 828 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 NT5DC3Q86UY8 548 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 PDCD6IPQ8WUM4 868 aaKnown RBP14.85□□□□□ -0.03
USB1-203ENST00000539737 ECHDC3Q96DC8 303 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 NUS1Q96E22 293 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 COQ10AQ96MF6 247 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 TSGA13Q96PP4 275 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 ALS2CR12Q96Q35 445 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 TAAR9Q96RI9 348 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 MGME1Q9BQP7 344 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 ZMYND15Q9H091 742 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 BRD8Q9H0E9 1235 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 KCTD5Q9NXV2 234 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 AMACRQ9UHK6 382 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 GUCA1BQ9UMX6 200 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 MAN2B2Q9Y2E5 1009 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 PRKAB1Q9Y478 270 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 PCDHGC4Q9Y5F7 938 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 HEY1Q9Y5J3 304 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 CAPN6Q9Y6Q1 641 aa14.85□□□□□ -0.03
USB1-203ENST00000539737 IGHV1OR21-1A0A087WYE8 117 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 A0A0U1RQJ8 604 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 PDE2AO00408 941 aaPredicted RBP14.84□□□□□ -0.03
USB1-203ENST00000539737 TRAFD1O14545 582 aaPredicted RBP14.84□□□□□ -0.03
USB1-203ENST00000539737 MATN3O15232 486 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 MTSS1O43312 755 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 THRAP10827 490 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 MYCLP1P12525 358 aaPredicted RBP14.84□□□□□ -0.03
USB1-203ENST00000539737 CTPS1P17812 591 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 PTPN7P35236 360 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 ADCY8P40145 1251 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 NR2C2P49116 596 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 ATP1A2P50993 1020 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 DYNLT1P63172 113 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 PPIDQ08752 370 aaKnown RBP14.84□□□□□ -0.03
USB1-203ENST00000539737 BIRC2Q13490 618 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 DEFB109BQ30KR1 87 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 RALGPS1Q5JS13 557 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 TMEM164Q5U3C3 297 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 KAZNQ674X7 775 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 C16orf46Q6P387 395 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 XKR5Q6UX68 686 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 CCDC13Q8IYE1 715 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 NDUFAF2Q8N183 169 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 CCNYQ8ND76 341 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 MAML1Q92585 1016 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 TMEM159Q96B96 161 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 OLFM3Q96PB7 478 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 FRMD8Q9BZ67 464 aaPredicted RBP14.84□□□□□ -0.03
USB1-203ENST00000539737 KLHL3Q9UH77 587 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 EFR3BQ9Y2G0 817 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 MYO9AB2RTY4 2548 aa14.84□□□□□ -0.03
USB1-203ENST00000539737 TNFRSF10CO14798 259 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 CST8O60676 142 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 SOCS5O75159 536 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 MAP3K6O95382 1288 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 FTCDO95954 541 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 SFTPCP11686 197 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 ACTR1BP42025 376 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 CCR10P46092 362 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 MLLT10P55197 1068 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 ACTR1AP61163 376 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 MAXP61244 160 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 CDK3Q00526 305 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 GSE1Q14687 1217 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 FAM182AQ5T1J6 154 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 Q6ZVL8 140 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 PGBD5Q8N414 524 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 TEX26Q8N6G2 289 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 C9orf43Q8TAL5 461 aaPredicted RBP14.83□□□□□ -0.04
USB1-203ENST00000539737 PDLIM2Q96JY6 352 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 NUDCD1Q96RS6 583 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms