RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PPLO60437 1756 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 STX16-NPEPL1H3BU86 382 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 STX16O14662 325 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 PRAMEF1O95521 474 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 EOMESO95936 686 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 ICAM3P32942 547 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 DGKGP49619 791 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 CYP4F3Q08477 520 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 CAMK1Q14012 370 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 JAZF1Q86VZ6 243 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 KBTBD2Q8IY47 623 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 LCN9Q8WX39 176 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 AP3S1Q92572 193 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 HOPXQ9BPY8 73 aaPredicted RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 C11orf84Q9BUA3 381 aaPredicted RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 PDCD10Q9BUL8 212 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 CCDC177Q9NQR7 707 aaPredicted RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 PHF11Q9UIL8 331 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 BAZ2BQ9UIF8 2168 aaKnown RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 ARL5CA6NH57 179 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 FSBPO95073 299 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 SLC35G6P0C7Q6 338 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 HNRNPH3P31942 346 aaKnown RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 SLC7A2P52569 658 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 ERICH5Q6P6B1 374 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 ATCAYQ86WG3 371 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 CFAP206Q8IYR0 622 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 TSPAN14Q8NG11 270 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 CLHC1Q8NHS4 586 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 C2orf15Q8WU43 125 aaKnown RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 XAGE5Q8WWM1 108 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 KIF1AQ12756 1690 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 IPO13O94829 963 aaKnown RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 CLDN9O95484 217 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 ARL2P36404 184 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 VARS2Q5ST30 1063 aaKnown RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 UBR7Q8N806 425 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 GBA3Q9H227 469 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 NUDT4Q9NZJ9 180 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 ABI3Q9P2A4 366 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 SSR3Q9UNL2 185 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 IRAK3Q9Y616 596 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 ZNF541Q9H0D2 1346 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 KIF20BQ96Q89 1820 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 LIN7AO14910 233 aaPredicted RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 LRIG2O94898 1065 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 C4BPAP04003 597 aaKnown RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 INHAP05111 366 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 XKR4Q5GH76 650 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 POMZP3Q6PJE2 187 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 ARL14EPQ8N8R7 260 aaPredicted RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 C1orf127Q8N9H9 656 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 NDRG1Q92597 394 aaKnown RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 GPR21Q99679 349 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 HNRNPABQ99729 332 aaKnown RBP16.72■□□□□ 0.27
SCARB1-205ENST00000538291 ARHGEF4Q9NR80 690 aa16.72■□□□□ 0.27
SCARB1-205ENST00000538291 SMPD1P17405 629 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 SEC13P55735 322 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 DSC2Q02487 901 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 C2orf80Q0P641 193 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 ATXN7L2Q5T6C5 722 aaPredicted RBP16.71■□□□□ 0.27
SCARB1-205ENST00000538291 PIH1D2Q8WWB5 315 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 SLC9A6Q92581 669 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 KCNS3Q9BQ31 491 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 SLC25A51Q9H1U9 297 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 SLC35C2Q9NQQ7 365 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 A0A0J9YYE9 177 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 OR2AG2A6NM03 316 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 KHDRBS3O75525 346 aaKnown RBP16.71■□□□□ 0.27
SCARB1-205ENST00000538291 DBTP11182 482 aaKnown RBP16.71■□□□□ 0.27
SCARB1-205ENST00000538291 MSANTD2Q6P1R3 559 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 VANGL1Q8TAA9 524 aaPredicted RBP16.71■□□□□ 0.27
SCARB1-205ENST00000538291 NARS2Q96I59 477 aaKnown RBP16.71■□□□□ 0.27
SCARB1-205ENST00000538291 PNPOQ9NVS9 261 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 HAT1O14929 419 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 IDH3BO43837 385 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 TNFRSF21O75509 655 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 PBX3P40426 434 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 RPIAP49247 311 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 PCDHB18PQ96TA0 734 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 TDRD1Q9BXT4 1180 aaKnown RBP16.71■□□□□ 0.27
SCARB1-205ENST00000538291 FAM192AQ9GZU8 254 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 STXBP5LQ9Y2K9 1186 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 C8AP07357 584 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 BPGMP07738 259 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 SAGP10523 405 aaPredicted RBP16.71■□□□□ 0.27
SCARB1-205ENST00000538291 L1CAMP32004 1257 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 CDK9P50750 372 aaKnown RBP16.71■□□□□ 0.27
SCARB1-205ENST00000538291 ACAP2Q15057 778 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 FAM91A1Q658Y4 838 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 MED27Q6P2C8 311 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 ZNF730Q6ZMV8 503 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 KREMEN2Q8NCW0 462 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 ZHX1-C8orf76Q96EF9 292 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 SYT17Q9BSW7 474 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 TBC1D10AQ9BXI6 508 aa16.71■□□□□ 0.27
SCARB1-205ENST00000538291 MAFBQ9Y5Q3 323 aaPredicted RBP16.71■□□□□ 0.27
SCARB1-205ENST00000538291 KCNU1A8MYU2 1149 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 PGRMC2O15173 223 aa16.71■□□□□ 0.26
SCARB1-205ENST00000538291 ZBTB22O15209 634 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms