RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 HID1Q8IV36 788 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 DNAAF3Q8N9W5 541 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 DEFB124Q8NES8 71 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 OR56A4Q8NGH8 313 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 GRK7Q8WTQ7 553 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 GLYATL1Q969I3 302 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 MFSD3Q96ES6 412 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 HIC2Q96JB3 615 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 SIGLEC10Q96LC7 697 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 FCRL3Q96P31 734 aaPredicted RBP12.97□□□□□ -0.33
CHFR-216ENST00000538235 BOCQ9BWV1 1114 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 CYP4F12Q9HCS2 524 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 PHPT1Q9NRX4 125 aaPredicted RBP12.97□□□□□ -0.33
CHFR-216ENST00000538235 KLQ9UEF7 1012 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 APOBEC3BQ9UH17 382 aaKnown RBP12.97□□□□□ -0.33
CHFR-216ENST00000538235 FEZ2Q9UHY8 353 aaPredicted RBP12.97□□□□□ -0.33
CHFR-216ENST00000538235 SNX24Q9Y343 169 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 CACNA1AO00555 2505 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 TRBV5-4A0A0C4DH59 114 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 DCDC2BA2VCK2 349 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 PRR19A6NJB7 356 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 H7C0S8 307 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 CACNB4O00305 520 aaPredicted RBP12.96□□□□□ -0.33
CHFR-216ENST00000538235 FFAR2O15552 330 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.33
CHFR-216ENST00000538235 SRP72O76094 671 aaKnown RBP12.96□□□□□ -0.33
CHFR-216ENST00000538235 AK4P27144 223 aaPredicted RBP12.96□□□□□ -0.33
CHFR-216ENST00000538235 MC4RP32245 332 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 ITGA8P53708 1063 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 DHX34Q14147 1143 aaKnown RBP12.96□□□□□ -0.33
CHFR-216ENST00000538235 FASTKD3Q14CZ7 662 aaKnown RBP12.96□□□□□ -0.33
CHFR-216ENST00000538235 WHAMMP3Q1A5X7 153 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 UBAP2Q5T6F2 1119 aaKnown RBP12.96□□□□□ -0.33
CHFR-216ENST00000538235 IL27RAQ6UWB1 636 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 C4orf22Q6V702 233 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 C11orf96Q7Z7L8 435 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 LDB1Q86U70 411 aaPredicted RBP12.96□□□□□ -0.33
CHFR-216ENST00000538235 NAXDQ8IW45 347 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 UNC5BQ8IZJ1 945 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 GPR161Q8N6U8 529 aaKnown RBP12.96□□□□□ -0.33
CHFR-216ENST00000538235 MCUQ8NE86 351 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 FAM174AQ8TBP5 190 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 BTN2A2Q8WVV5 523 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 CDKN2AIPNLQ96HQ2 116 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 VPS35Q96QK1 796 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 ZSCAN5AQ9BUG6 496 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 DPH5Q9H2P9 285 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 SMOXQ9NWM0 555 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 TOR4AQ9NXH8 423 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 GULP1Q9UBP9 304 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 SLC23A2Q9UGH3 650 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 PCOLCE2Q9UKZ9 415 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 DGKBQ9Y6T7 804 aa12.96□□□□□ -0.33
CHFR-216ENST00000538235 ESYT3A0FGR9 886 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 TOR1BO14657 336 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 CRTAMO95727 393 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 IVLP07476 585 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 ADRA1DP25100 572 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 ADCY8P40145 1251 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 GNPDA1P46926 289 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 ATXN3P54252 364 aaPredicted RBP12.95□□□□□ -0.34
CHFR-216ENST00000538235 SLC7A5Q01650 507 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 PPARDQ03181 441 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 NFATC2Q13469 925 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 DBN1Q16643 649 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 DEFB133Q30KQ1 61 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 PLA2G4EQ3MJ16 856 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 PYCR3Q53H96 274 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 PRRT3Q5FWE3 981 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 DUPD1Q68J44 220 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 DCP2Q8IU60 420 aaKnown RBP12.95□□□□□ -0.34
CHFR-216ENST00000538235 PPIL6Q8IXY8 311 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 EID2Q8N6I1 236 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 RASGEF1AQ8N9B8 481 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 DDHD1Q8NEL9 900 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 DTX3LQ8TDB6 740 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 LMX1AQ8TE12 382 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 STYXQ8WUJ0 223 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 PATE1Q8WXA2 126 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 HDAC10Q969S8 669 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 SRPK1Q96SB4 655 aaKnown RBP12.95□□□□□ -0.34
CHFR-216ENST00000538235 LRRC1Q9BTT6 524 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 KIFC1Q9BW19 673 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 OR2AG1Q9H205 316 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 CARS2Q9HA77 564 aaKnown RBP12.95□□□□□ -0.34
CHFR-216ENST00000538235 DMGDHQ9UI17 866 aaKnown RBP12.95□□□□□ -0.34
CHFR-216ENST00000538235 SOX13Q9UN79 622 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 PKP3Q9Y446 797 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 PCDHGB2Q9Y5G2 931 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 PRSS21Q9Y6M0 314 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 ADAMTS20P59510 1910 aa12.95□□□□□ -0.34
CHFR-216ENST00000538235 IGLV3-16A0A075B6K0 115 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 ZCWPW2A0A1B0GU75 182 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 SPAARA0A1B0GVQ0 90 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 HEATR9A2RTY3 570 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 C2orf81A6NN90 581 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 EFCAB8A8MWE9 144 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 GOLGA8KD6RF30 607 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 GOLGA8TH3BQL2 631 aa12.94□□□□□ -0.34
CHFR-216ENST00000538235 TNFRSF10CO14798 259 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms