RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 NAT2P11245 290 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 MYL4P12829 197 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 TFEBP19484 476 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 SLC26A3P40879 764 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 RHOAP61586 193 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 CDH18Q13634 790 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 GK3PQ14409 553 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 PDCD2Q16342 344 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-210ENST00000538120 TRIM67Q6ZTA4 783 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 CCDC149Q6ZUS6 474 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 ISCA2Q86U28 154 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 KBTBD6Q86V97 674 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 SPATA24Q86W54 205 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 FBXW8Q8N3Y1 598 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 DRAXINQ8NBI3 349 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-210ENST00000538120 DDI1Q8WTU0 396 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 PDCD6IPQ8WUM4 868 aaKnown RBP10.68□□□□□ -0.7
CLIP1-210ENST00000538120 LPGAT1Q92604 370 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 PTERQ96BW5 349 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 LMLNQ96KR4 655 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 PPP1R36Q96LQ0 422 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 VCX3BQ9H321 246 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 POMKQ9H5K3 350 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 VCX3AQ9NNX9 186 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 HCFC1R1Q9NWW0 138 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 PLK2Q9NYY3 685 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 UBAP1Q9NZ09 502 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 LSM7Q9UK45 103 aaKnown RBP10.68□□□□□ -0.7
CLIP1-210ENST00000538120 COMMD3-BMI1R4GMX3 469 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 C15orf38-AP3S2A0A0A6YYH1 394 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 C2orf81A6NN90 581 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 LEFTY2O00292 366 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 CCL16O15467 120 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 RBP1P09455 135 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 SMIM18P0DKX4 95 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 LPOP22079 712 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-210ENST00000538120 KPNA2P52292 529 aaKnown RBP10.68□□□□□ -0.7
CLIP1-210ENST00000538120 INHBCP55103 352 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 LMAN2Q12907 356 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 PRKAA1Q13131 559 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 TBC1D25Q3MII6 688 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 PAOXQ6QHF9 649 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 AFTPHQ6ULP2 937 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 ARPINQ7Z6K5 226 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 SDCCAG8Q86SQ7 713 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-210ENST00000538120 PIANPQ8IYJ0 282 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 CCNYL1Q8N7R7 359 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 KDM1BQ8NB78 822 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 SVIPQ8NHG7 77 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 RIN3Q8TB24 985 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 BADQ92934 168 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 EID2BQ96D98 161 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 TCF25Q9BQ70 676 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 CORO1BQ9BR76 489 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 CCDC28BQ9BUN5 200 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 ADGRE3Q9BY15 652 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 WDR55Q9H6Y2 383 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-210ENST00000538120 INTS10Q9NVR2 710 aaKnown RBP10.68□□□□□ -0.7
CLIP1-210ENST00000538120 POLR3BQ9NW08 1133 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-210ENST00000538120 INTS6Q9UL03 887 aaKnown RBP10.68□□□□□ -0.7
CLIP1-210ENST00000538120 INSL6Q9Y581 213 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 SLC4A7Q9Y6M7 1214 aa10.68□□□□□ -0.7
CLIP1-210ENST00000538120 TRAV19A0A0A6YYK7 116 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 TYW5A2RUC4 315 aaKnown RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 HDAC3O15379 428 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 MOSPD3O75425 235 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 ZNF821O75541 412 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 JUNP05412 331 aaKnown RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 ADH1AP07327 375 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 PIM1P11309 404 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 COX4I1P13073 169 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 CD1DP15813 335 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 CD70P32970 193 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 RANBP1P43487 201 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 CHN2P52757 468 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 ATXN3P54252 364 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 MTTPP55157 894 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 TJAP1Q5JTD0 557 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 PPM1LQ5SGD2 360 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 TPGS1Q6ZTW0 290 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 EFHBQ8N7U6 833 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 VOPP1Q96AW1 172 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 CMTM5Q96DZ9 223 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 ALG9Q9H6U8 611 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 RMI1Q9H9A7 625 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 POPDC3Q9HBV1 291 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 CYP4F12Q9HCS2 524 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 IRAK4Q9NWZ3 460 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 LIMD1Q9UGP4 676 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 FKBPLQ9UIM3 349 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 ZNF510Q9Y2H8 683 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 IRAK3Q9Y616 596 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 GOLGA8QA0A0J9YX86 632 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 GOLGA8OA6NCC3 632 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 GOLGA8NF8WBI6 632 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 IPO13O94829 963 aaKnown RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 CSPG5O95196 566 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 HSPA8P11142 646 aaKnown RBP10.67□□□□□ -0.7
CLIP1-210ENST00000538120 PMLP29590 882 aa10.67□□□□□ -0.7
CLIP1-210ENST00000538120 SERPINB5P36952 375 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms