RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	HLA-DPA1	P20036	260 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	HMGCL	P35914	325 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	DUSP3	P51452	185 aa	Predicted RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	MAZ	P56270	477 aa	Known RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	DCDC1	P59894	354 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	MSLN	Q13421	630 aa	Predicted RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	OASL	Q15646	514 aa	Known RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	ST3GAL2	Q16842	350 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	ATP13A5	Q4VNC0	1218 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	LVRN	Q6Q4G3	990 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	GLT6D1	Q7Z4J2	308 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	REXO1L1P	Q8IX06	675 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	RAVER1	Q8IY67	606 aa	Known RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	GLIS1	Q8NBF1	620 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	MAPK15	Q8TD08	544 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	CCDC74A	Q96AQ1	378 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	ALS2CR12	Q96Q35	445 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	DPEP2	Q9H4A9	486 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	IL26	Q9NPH9	171 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	PIH1D1	Q9NWS0	290 aa	Known RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	IL17C	Q9P0M4	197 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	TAAR2	Q9P1P5	351 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	ATXN10	Q9UBB4	475 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	PCDHB1	Q9Y5F3	818 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	ARL5A	Q9Y689	179 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	UNC13C	Q8NB66	2214 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	CFAP47	Q6ZTR5	3102 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	ZFHX4	Q86UP3	3567 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	RGSL1	A5PLK6	1076 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	TAF4	O00268	1085 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	STK10	O94804	968 aa	Known RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	MT-CO3	P00414	261 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	GP1BA	P07359	652 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	ZNF8	P17098	575 aa	Predicted RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	ILF3	Q12906	894 aa	Known RBP eCLIP	10.74	□□□□□ -0.69	1e-6	■■■■□ 19.4
LDHA-215	ENST00000537296	CDCP2	Q5VXM1	449 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	KCTD11	Q693B1	232 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	OGFOD3	Q6PK18	319 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	FAM151B	Q6UXP7	276 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	ARHGEF18	Q6ZSZ5	1173 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	CHST15	Q7LFX5	561 aa	Predicted RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	ADGRG6	Q86SQ4	1221 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	PARP9	Q8IXQ6	854 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	KLHDC8B	Q8IXV7	354 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	TRAM1L1	Q8N609	369 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	DCBLD1	Q8N8Z6	715 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	NAT14	Q8WUY8	206 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	SCG3	Q8WXD2	468 aa	Known RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	OR2M4	Q96R27	311 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	CCDC3	Q9BQI4	270 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	FERMT1	Q9BQL6	677 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	OR2AG1	Q9H205	316 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	CARD9	Q9H257	536 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	ZNHIT2	Q9UHR6	403 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	CLCA2	Q9UQC9	943 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	RNF215	Q9Y6U7	377 aa		10.74	□□□□□ -0.69
LDHA-215	ENST00000537296	TRBV23OR9-2	A0A075B6M9	112 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296		A0A1W2PNU3	283 aa	Predicted RBP	10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	CCL22	O00626	93 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	UGT1A9	O60656	530 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	SLC25A14	O95258	325 aa	Predicted RBP	10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	ECEL1	O95672	775 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	PYGL	P06737	847 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	ZSCAN5DP	P0CG00	497 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	TPH1	P17752	444 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	UGT1A6	P19224	532 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	UGT1A1	P22309	533 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	UGT1A4	P22310	534 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	UGT1A3	P35503	534 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	UGT1A5	P35504	534 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	ACTR1B	P42025	376 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	RPIA	P49247	311 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	PDX1	P52945	283 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	ACTR1A	P61163	376 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	E2F1	Q01094	437 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	CYP4F3	Q08477	520 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	HLTF	Q14527	1009 aa	Known RBP eCLIP	10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	PRPSAP1	Q14558	356 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	CHRNA6	Q15825	494 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	PARP6	Q2NL67	630 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	PLA2G4E	Q3MJ16	856 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	C14orf28	Q4W4Y0	310 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	ZNF569	Q5MCW4	686 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	GALNT13	Q8IUC8	556 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	NAGS	Q8N159	534 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	SDR16C5	Q8N3Y7	309 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	TRIM58	Q8NG06	486 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	OR13C4	Q8NGS5	318 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	ZDHHC1	Q8WTX9	485 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	ZCCHC14	Q8WYQ9	949 aa	Known RBP	10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	GLMN	Q92990	594 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	GLYATL1	Q969I3	302 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	RTP4	Q96DX8	246 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	PLEKHG4B	Q96PX9	1271 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	TBL1Y	Q9BQ87	522 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	ZSCAN5A	Q9BUG6	496 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	GSDMC	Q9BYG8	508 aa		10.73	□□□□□ -0.69
LDHA-215	ENST00000537296	CDH19	Q9H159	772 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms