RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 TBL1YQ9BQ87 522 aa17.84■□□□□ 0.45
CCDC61-201ENST00000536603 DUSP23Q9BVJ7 150 aa17.84■□□□□ 0.45
CCDC61-201ENST00000536603 SPATA16Q9BXB7 569 aa17.84■□□□□ 0.45
CCDC61-201ENST00000536603 FRMD8Q9BZ67 464 aaPredicted RBP17.84■□□□□ 0.45
CCDC61-201ENST00000536603 DRG1Q9Y295 367 aaKnown RBP17.84■□□□□ 0.45
CCDC61-201ENST00000536603 TMEM98Q9Y2Y6 226 aa17.84■□□□□ 0.45
CCDC61-201ENST00000536603 PCDHB1Q9Y5F3 818 aa17.84■□□□□ 0.45
CCDC61-201ENST00000536603 PRSS38A1L453 326 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 FADS2P1A8MWK0 482 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 LMO7DNF2Z398 122 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 YY2O15391 372 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 FUCA1P04066 466 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 MPOP05164 745 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 ANXA6P08133 673 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 PLA2G2AP14555 144 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 ELOCQ15369 112 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 KCTD11Q693B1 232 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 DRICH1Q6PGQ1 229 aaPredicted RBP17.83■□□□□ 0.44
CCDC61-201ENST00000536603 TRIM74Q86UV6 250 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 KLHDC8BQ8IXV7 354 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 CCDC89Q8N998 374 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 PTCD2Q8WV60 388 aaKnown RBP17.83■□□□□ 0.44
CCDC61-201ENST00000536603 ZNF592Q92610 1267 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 APOLD1Q96LR9 279 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 TMEM168Q9H0V1 697 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 CDH19Q9H159 772 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 SUDS3Q9H7L9 328 aaPredicted RBP17.83■□□□□ 0.44
CCDC61-201ENST00000536603 CARS2Q9HA77 564 aaKnown RBP17.83■□□□□ 0.44
CCDC61-201ENST00000536603 EVA1BQ9NVM1 165 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 CNOT6Q9ULM6 557 aaKnown RBP17.83■□□□□ 0.44
CCDC61-201ENST00000536603 DOLKQ9UPQ8 538 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 SLC17A4Q9Y2C5 497 aa17.83■□□□□ 0.44
CCDC61-201ENST00000536603 TPP1O14773 563 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 PSMD3O43242 534 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 BUD23O43709 281 aaKnown RBP17.82■□□□□ 0.44
CCDC61-201ENST00000536603 OPA1O60313 960 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 ASMTLO95671 621 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 MYF5P13349 255 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 KCNJ1P48048 391 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 TMPRSS3P57727 454 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 DCDC1P59894 354 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 GABREP78334 506 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 DENND5AQ6IQ26 1287 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 CREG2Q8IUH2 290 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 LSMEM2Q8N112 164 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 PRELID2Q8N945 189 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 GLIS1Q8NBF1 620 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 COX14Q96I36 57 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 ZNF578Q96N58 590 aaPredicted RBP17.82■□□□□ 0.44
CCDC61-201ENST00000536603 ZSCAN5AQ9BUG6 496 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 LRRC40Q9H9A6 602 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 ETNK1Q9HBU6 452 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 ARNT2Q9HBZ2 717 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 HOMER3Q9NSC5 361 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 IL17CQ9P0M4 197 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 SUFUQ9UMX1 484 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 SAR1BQ9Y6B6 198 aa17.82■□□□□ 0.44
CCDC61-201ENST00000536603 LRP4O75096 1905 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 ERVH48-1M5A8F1 160 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 KIF2AO00139 706 aaPredicted RBP17.81■□□□□ 0.44
CCDC61-201ENST00000536603 AP2A1O95782 977 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 ZSCAN5DPP0CG00 497 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 CKMT1AP12532 417 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 TCP1P17987 556 aaKnown RBP17.81■□□□□ 0.44
CCDC61-201ENST00000536603 GNPDA1P46926 289 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 DUSP3P51452 185 aaPredicted RBP17.81■□□□□ 0.44
CCDC61-201ENST00000536603 UCNP55089 124 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 PTPRCAPQ14761 206 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 ZCCHC8Q6NZY4 707 aaKnown RBP17.81■□□□□ 0.44
CCDC61-201ENST00000536603 MARK2Q7KZI7 788 aaKnown RBP17.81■□□□□ 0.44
CCDC61-201ENST00000536603 GSTA5Q7RTV2 222 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 TAF8Q7Z7C8 310 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 GKN2Q86XP6 184 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 TRAM1L1Q8N609 369 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 FAM181AQ8N9Y4 354 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 COL26A1Q96A83 441 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 CAPZA3Q96KX2 299 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 PLEKHG4BQ96PX9 1271 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 NFKBIL1Q9UBC1 381 aaPredicted RBP17.81■□□□□ 0.44
CCDC61-201ENST00000536603 TTC7AQ9ULT0 858 aaPredicted RBP17.81■□□□□ 0.44
CCDC61-201ENST00000536603 PKP3Q9Y446 797 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 ARL5AQ9Y689 179 aa17.81■□□□□ 0.44
CCDC61-201ENST00000536603 OAS3Q9Y6K5 1087 aaKnown RBP17.81■□□□□ 0.44
CCDC61-201ENST00000536603 C2orf81A6NN90 581 aa17.8■□□□□ 0.44
CCDC61-201ENST00000536603 CES2O00748 559 aa17.8■□□□□ 0.44
CCDC61-201ENST00000536603 STX7O15400 261 aaKnown RBP17.8■□□□□ 0.44
CCDC61-201ENST00000536603 CSO75390 466 aaKnown RBP17.8■□□□□ 0.44
CCDC61-201ENST00000536603 TUBB4AP04350 444 aa17.8■□□□□ 0.44
CCDC61-201ENST00000536603 IVLP07476 585 aa17.8■□□□□ 0.44
CCDC61-201ENST00000536603 TPH1P17752 444 aa17.8■□□□□ 0.44
CCDC61-201ENST00000536603 LPOP22079 712 aaPredicted RBP17.8■□□□□ 0.44
CCDC61-201ENST00000536603 FDFT1P37268 417 aa17.8■□□□□ 0.44
CCDC61-201ENST00000536603 MSLNQ13421 630 aaPredicted RBP17.8■□□□□ 0.44
CCDC61-201ENST00000536603 TAF1AQ15573 450 aaPredicted RBP17.8■□□□□ 0.44
CCDC61-201ENST00000536603 ARHGAP40Q5TG30 622 aa17.8■□□□□ 0.44
CCDC61-201ENST00000536603 LVRNQ6Q4G3 990 aa17.8■□□□□ 0.44
CCDC61-201ENST00000536603 SDR16C5Q8N3Y7 309 aa17.8■□□□□ 0.44
CCDC61-201ENST00000536603 CCL4L1Q8NHW4 92 aa17.8■□□□□ 0.44
CCDC61-201ENST00000536603 BRSK1Q8TDC3 778 aa17.8■□□□□ 0.44
CCDC61-201ENST00000536603 KCNE4Q8WWG9 221 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms