RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 FASTKQ14296 549 aaKnown RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 SQLEQ14534 574 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 LYSMD3Q7Z3D4 306 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 ITIH5Q86UX2 942 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 FAM217AQ8IXS0 508 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 CMTR2Q8IYT2 770 aaKnown RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 ST13P4Q8IZP2 240 aaPredicted RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 HS6ST3Q8IZP7 471 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 DCAF4L2Q8NA75 395 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 BHLHE22Q8NFJ8 381 aaPredicted RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 DDI1Q8WTU0 396 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 LRGUKQ96M69 825 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 KCNA7Q96RP8 456 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 MRPL1Q9BYD6 325 aaKnown RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 CRISPLD2Q9H0B8 497 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 NPEPPSL1A6NEC2 478 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 NCF1BA6NI72 391 aaPredicted RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 IQCF5A8MTL0 148 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 NCF1CA8MVU1 366 aaPredicted RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 TGM5O43548 720 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 PYGLP06737 847 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 CNPP09543 421 aaKnown RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 NCF1P14598 390 aaPredicted RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 ATP6V0D1P61421 351 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 FOLH1Q04609 750 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 ADGRE1Q14246 886 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 AGKQ53H12 422 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 RARS2Q5T160 578 aaKnown RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 NAIF1Q69YI7 327 aaPredicted RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 TAS2R42Q7RTR8 314 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 FBXO39Q8N4B4 442 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 PIP4K2CQ8TBX8 421 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 CD200R1Q8TD46 325 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 EEF1AKMT1Q8WVE0 214 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 PIH1D2Q8WWB5 315 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 ASB2Q96Q27 587 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 HACD3Q9P035 362 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 RIMS3Q9UJD0 308 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 VPS9D1Q9Y2B5 631 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 ZNF711Q9Y462 761 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 CAPN8A6NHC0 703 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 BTN3A1O00481 513 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 FBP2O00757 339 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 ACOT8O14734 319 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 VPS26AO75436 327 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 CKMP06732 381 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 ALDOCP09972 364 aaKnown RBP13.27□□□□□ -0.29
VPS33B-202ENST00000535906 ACRP10323 421 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 GJA1P17302 382 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 GKP32189 559 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 HMGCLP35914 325 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 CLCN4P51793 760 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 CLCQ05315 142 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 STX5Q13190 355 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 PDK3Q15120 406 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 MAPRE2Q15555 327 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 GEN1Q17RS7 908 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 FBXL19Q6PCT2 694 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 SLC30A9Q6PML9 568 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 TPGS1Q6ZTW0 290 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 NKAPQ8N5F7 415 aaKnown RBP13.27□□□□□ -0.29
VPS33B-202ENST00000535906 OR9I1Q8NGQ6 314 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 CCDC97Q96F63 343 aaPredicted RBP13.27□□□□□ -0.29
VPS33B-202ENST00000535906 DCUN1D1Q96GG9 259 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 GPR63Q9BZJ6 419 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 TUBB1Q9H4B7 451 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 AKTIPQ9H8T0 292 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 MAGEE1Q9HCI5 957 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 SEMA4BQ9NPR2 832 aaPredicted RBP13.27□□□□□ -0.29
VPS33B-202ENST00000535906 PAPOLBQ9NRJ5 636 aaKnown RBP13.27□□□□□ -0.29
VPS33B-202ENST00000535906 GIMAP2Q9UG22 337 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 EVLQ9UI08 416 aaPredicted RBP13.27□□□□□ -0.29
VPS33B-202ENST00000535906 PKP3Q9Y446 797 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 DENND4CQ5VZ89 1909 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 TRIM38O00635 465 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 AZIN1O14977 448 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 PIP5K1BO14986 540 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 DENRO43583 198 aaKnown RBP13.27□□□□□ -0.29
VPS33B-202ENST00000535906 PGLSO95336 258 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 CHRM3P20309 590 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 RFC2P35250 354 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 PSMD8P48556 350 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 AGTR2P50052 363 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 ARMC12Q5T9G4 340 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 UGT2A3Q6UWM9 527 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 PCDH20Q8N6Y1 951 aaKnown RBP13.27□□□□□ -0.29
VPS33B-202ENST00000535906 CATSPER1Q8NEC5 780 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
VPS33B-202ENST00000535906 NAT14Q8WUY8 206 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 TWIST2Q8WVJ9 160 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 MYO19Q96H55 970 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 GCNAQ96QF7 691 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 YME1L1Q96TA2 773 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 C2orf49Q9BVC5 232 aaPredicted RBP13.27□□□□□ -0.29
VPS33B-202ENST00000535906 LRRC3Q9BY71 257 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 CFAP97Q9P2B7 532 aa13.27□□□□□ -0.29
VPS33B-202ENST00000535906 TRMT6Q9UJA5 497 aaKnown RBP13.27□□□□□ -0.29
VPS33B-202ENST00000535906 DOCK6Q96HP0 2047 aa13.26□□□□□ -0.29
VPS33B-202ENST00000535906 PRSS51A0A1B0GVH4 220 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms