RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 PWP1Q13610 501 aa17.14■□□□□ 0.33
PHRF1-206ENST00000534320 PAFAH1B3Q15102 231 aaKnown RBP17.14■□□□□ 0.33
PHRF1-206ENST00000534320 ZNF549Q6P9A3 640 aa17.14■□□□□ 0.33
PHRF1-206ENST00000534320 RBM23Q86U06 439 aaKnown RBP17.14■□□□□ 0.33
PHRF1-206ENST00000534320 RASAL3Q86YV0 1011 aa17.14■□□□□ 0.33
PHRF1-206ENST00000534320 AADATQ8N5Z0 425 aa17.14■□□□□ 0.33
PHRF1-206ENST00000534320 WDR36Q8NI36 951 aaKnown RBP17.14■□□□□ 0.33
PHRF1-206ENST00000534320 PRRG3Q9BZD7 231 aa17.14■□□□□ 0.33
PHRF1-206ENST00000534320 SLC17A6Q9P2U8 582 aa17.14■□□□□ 0.33
PHRF1-206ENST00000534320 A0A0J9YYE9 177 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 SGTAO43765 313 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 HLA-DQB2P05538 268 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 SPAM1P38567 509 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 RXRGP48443 463 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 AP1S1P61966 158 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 TIMM50Q3ZCQ8 353 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 CES5AQ6NT32 575 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 UBE2R2Q712K3 238 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-206ENST00000534320 TJP1Q07157 1748 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 C9IYK1 514 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 GHRHRQ02643 423 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 ZNF614Q8N883 585 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 SUN5Q8TC36 379 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 S100ZQ8WXG8 99 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 QRFPRQ96P65 431 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 CRTAC1Q9NQ79 661 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 KCTD5Q9NXV2 234 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 FCF1Q9Y324 198 aaKnown RBP17.13■□□□□ 0.33
PHRF1-206ENST00000534320 BTAF1O14981 1849 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 FAM159BA6NKW6 160 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 FAM180AQ6UWF9 173 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 GCNT7Q6ZNI0 430 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.13■□□□□ 0.332e-7■■■■■ 27.8
PHRF1-206ENST00000534320 BBS4Q96RK4 519 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 PIGUQ9H490 435 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 CARD8Q9Y2G2 431 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 ANKRD36CQ5JPF3 1778 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 TRIM43BA6NCK2 446 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 BBIP1A8MTZ0 92 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 AREL1O15033 823 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 PGM3O95394 542 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 SLC18A1P54219 525 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 TUBA4AP68366 448 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 DGKKQ5KSL6 1271 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 ADHFE1Q8IWW8 467 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 UNC5BQ8IZJ1 945 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 UTP15Q8TED0 518 aaKnown RBP17.13■□□□□ 0.33
PHRF1-206ENST00000534320 TIFAQ96CG3 184 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 TNKS2Q9H2K2 1166 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 AK5Q9Y6K8 562 aa17.13■□□□□ 0.33
PHRF1-206ENST00000534320 PRAMEF1O95521 474 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 ANXA6P08133 673 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 TIGD2Q4W5G0 525 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 OR8D1Q8WZ84 308 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 TCF12Q99081 682 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 NUAK2Q9H093 628 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 SMOC2Q9H3U7 446 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 KRCC1Q9NPI7 259 aaPredicted RBP17.12■□□□□ 0.33
PHRF1-206ENST00000534320 BTN3A3O00478 584 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 NTRK1P04629 796 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 GSTM1P09488 218 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 CXCR3P49682 368 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 LDLRAD1Q5T700 205 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 SPATA19Q7Z5L4 167 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 KRT78Q8N1N4 520 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 UXS1Q8NBZ7 420 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 TWIST2Q8WVJ9 160 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 CLPTM1LQ96KA5 538 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 ADAMTS10Q9H324 1103 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 KLHL28Q9NXS3 571 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 EFCAB10A6NFE3 127 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 GNRH1P01148 92 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 ATP6V1C1P21283 382 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 CLDN10P78369 228 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 FBXL22Q6P050 247 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 KRT77Q7Z794 578 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 ZBTB2Q8N680 514 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 PIWIL1Q96J94 861 aaKnown RBP17.12■□□□□ 0.33
PHRF1-206ENST00000534320 FEM1CQ96JP0 617 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 TSEN34Q9BSV6 310 aaKnown RBP17.12■□□□□ 0.33
PHRF1-206ENST00000534320 POLR3HQ9Y535 204 aaPredicted RBP17.12■□□□□ 0.33
PHRF1-206ENST00000534320 KCNE2Q9Y6J6 123 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 STBD1O95210 358 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 CXCR2P25025 360 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 IDH3AP50213 366 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 SLC16A1P53985 500 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 WNT7BP56706 349 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 TNK2Q07912 1038 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 MAGEE2Q8TD90 523 aaPredicted RBP17.12■□□□□ 0.33
PHRF1-206ENST00000534320 MRPL48Q96GC5 212 aaKnown RBP17.12■□□□□ 0.33
PHRF1-206ENST00000534320 ABCG8Q9H221 673 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 CLIC5Q9NZA1 410 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 CNTN6Q9UQ52 1028 aa17.12■□□□□ 0.33
PHRF1-206ENST00000534320 ZNF697Q5TEC3 545 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 CLEC6AQ6EIG7 209 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 ATG14Q6ZNE5 492 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 GPR180Q86V85 440 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 HPS6Q86YV9 775 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 POC5Q8NA72 575 aa17.11■□□□□ 0.33
PHRF1-206ENST00000534320 PLEKHG4BQ96PX9 1271 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms