RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RNFT2Q96EX2 444 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 ADAMTS10Q9H324 1103 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 EPB41L4BQ9H329 900 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 SNX15Q9NRS6 342 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 FLRT1Q9NZU1 646 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 MTF2Q9Y483 593 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 CLDN4O14493 209 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 HIST1H2ABP04908 130 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 MYL12AP19105 171 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 MINDY4Q4G0A6 757 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF852Q6ZMS4 543 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 LPCAT2Q7L5N7 544 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 HIST3H2AQ7L7L0 130 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 OSTM1Q86WC4 334 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 AADATQ8N5Z0 425 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF366Q8N895 744 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 AVL9Q8NBF6 648 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 SRFBP1Q8NEF9 429 aaKnown RBP11.23□□□□□ -0.61
PTPRK-221ENST00000532331 HIST1H2ACQ93077 130 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 GPR62Q9BZJ7 368 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 LMAN2LQ9H0V9 348 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 CORO2BQ9UQ03 480 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 GABRB2P47870 512 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 PRKG2Q13237 762 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 MAPKAPK3Q16644 382 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 PDK4Q16654 411 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 MACC1Q6ZN28 852 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 EXOC3L1Q86VI1 746 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 GKN2Q86XP6 184 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 C12orf66Q96MD2 445 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 ADI1Q9BV57 179 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 PALMDQ9NP74 551 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 SCN11AQ9UI33 1791 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 TCRBV21S2A2A0A5A6 115 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 HEPACAM2A8MVW5 462 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 CHURC1-FNTBB4DL54 471 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 TEX28O15482 410 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 NTRK1P04629 796 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 POLD2P49005 469 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 CPSF6Q16630 551 aaKnown RBP eCLIP11.23□□□□□ -0.61
PTPRK-221ENST00000532331 FBXL22Q6P050 247 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 PACS1Q6VY07 963 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 TMCO2Q7Z6W1 182 aaPredicted RBP11.23□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF605Q86T29 641 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 CDYL2Q8N8U2 506 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF516Q92618 1163 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 OR2AG1Q9H205 316 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 COPG2Q9UBF2 871 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 MAFFQ9ULX9 164 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 TCRBV9S1A1TA0A576 114 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 H3BNH8 94 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 MAP2K7O14733 419 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 CYP4F2P78329 520 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 BST1Q10588 318 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF549Q6P9A3 640 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 BRAT1Q6PJG6 821 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 TPRG1Q6ZUI0 275 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 R3HCC1LQ7Z5L2 792 aaKnown RBP11.23□□□□□ -0.61
PTPRK-221ENST00000532331 TMPRSS11BQ86T26 416 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 AMZ2Q86W34 360 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF514Q96K75 400 aaPredicted RBP11.23□□□□□ -0.61
PTPRK-221ENST00000532331 CYP2S1Q96SQ9 504 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 SPATA5L1Q9BVQ7 753 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 XPR1Q9UBH6 696 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 RPS6KA6Q9UK32 745 aa11.23□□□□□ -0.61
PTPRK-221ENST00000532331 HDAC3O15379 428 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 ITPKAP23677 461 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 GSSP48637 474 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 RPL38P63173 70 aaKnown RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 MSANTD2Q6P1R3 559 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 LRRC74BQ6ZQY2 392 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 Q6ZVU0 165 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 SERPINA9Q86WD7 417 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 FAM46DQ8NEK8 389 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 BHLHE22Q8NFJ8 381 aaPredicted RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF599Q96NL3 588 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 TOX2Q96NM4 488 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 CNPPD1Q9BV87 410 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 GSDMCQ9BYG8 508 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 CXorf56Q9H5V9 222 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 POLR1BQ9H9Y6 1135 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 PCDH12Q9NPG4 1184 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 BCLAF3A2AJT9 711 aaKnown RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 FAM25AB3EWG3 89 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 FAM25CB3EWG5 89 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 FAM25GB3EWG6 89 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 TRIM24O15164 1050 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 SNX3O60493 162 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 HGFP14210 728 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 VARSP26640 1264 aaKnown RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 PBX1P40424 430 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 GPD2P43304 727 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 INAQ16352 499 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 SYPL2Q5VXT5 272 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 RASGRP3Q8IV61 690 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 FBXO30Q8TB52 745 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 ALG3Q92685 438 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 AARSD1Q9BTE6 412 aaKnown RBP11.22□□□□□ -0.61
PTPRK-221ENST00000532331 SGK2Q9HBY8 427 aa11.22□□□□□ -0.61
PTPRK-221ENST00000532331 SLC25A12O75746 678 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms