RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 GIMD1P0DJR0 217 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 PRLRP16471 622 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 DGKAP23743 735 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 HTR7P34969 479 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 RECQLP46063 649 aaPredicted RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 ERVPABLB-1P60509 514 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 E2F1Q01094 437 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLC10A7Q0GE19 358 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLC10A2Q12908 348 aaPredicted RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 DPYSL3Q14195 570 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 PARP15Q460N3 678 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 C3orf38Q5JPI3 329 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 LRRC73Q5JTD7 316 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 FAM46CQ5VWP2 391 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 NAPEPLDQ6IQ20 393 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 OGFOD2Q6N063 350 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 INO80CQ6PI98 192 aaPredicted RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 RAD9BQ6WBX8 426 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 ERN2Q76MJ5 926 aaKnown RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 DSG4Q86SJ6 1040 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 TSPYL5Q86VY4 417 aaPredicted RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 CREG2Q8IUH2 290 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 RYBPQ8N488 228 aaPredicted RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 SPC24Q8NBT2 197 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 KCTD6Q8NC69 237 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 OR2AP1Q8NGE2 309 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 PCDH19Q8TAB3 1148 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 SNRNP27Q8WVK2 155 aaKnown RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 TEKT4Q8WW24 435 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 KLHL32Q96NJ5 620 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 ALPK1Q96QP1 1244 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 EIF3CQ99613 913 aaKnown RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 NCAPGQ9BPX3 1015 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 GOLPH3Q9H4A6 298 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 ZDHHC6Q9H6R6 413 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 ERVMER34-1Q9H9K5 563 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 LHX3Q9UBR4 397 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 IPO11Q9UI26 975 aaKnown RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 ZFR2Q9UPR6 939 aaKnown RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 REXO2Q9Y3B8 237 aaKnown RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 PCDHA13Q9Y5I0 950 aa7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 EPN1Q9Y6I3 576 aaPredicted RBP7.04□□□□□ -1.28
TRIM53CP-201ENST00000531490 A0A0U1RQJ8 604 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 CXorf51AA0A1B0GTR3 108 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 A0A1W2PQU0 124 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 ZSCAN5CA6NGD5 496 aaPredicted RBP7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 ARHGAP42A6NI28 874 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 C3orf70A6NLC5 250 aaPredicted RBP7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 C16orf96A6NNT2 1141 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLC31A1O15431 190 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 LATO43561 262 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 MAFKO60675 156 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 PALMO75781 387 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 PCDH8O95206 1070 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 PIGNO95427 931 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 GSRP00390 522 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 PTMAP06454 111 aaKnown RBP7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 CKMT1AP12532 417 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 TNNT1P13805 278 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 COMTP21964 271 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 TGM2P21980 687 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 KDELR1P24390 212 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 ARL4AP40617 200 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 RHOAP61586 193 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 SNRPD1P62314 119 aaKnown RBP7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 FGL2Q14314 439 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 KRT81Q14533 505 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 LLGL1Q15334 1064 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 HADHQ16836 314 aaKnown RBP7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 ISXQ2M1V0 245 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 LINC00303Q3SY05 128 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLC45A4Q5BKX6 768 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 ANKRD20A8PQ5CZ79 823 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 SEL1L3Q68CR1 1132 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 PARS2Q7L3T8 475 aaKnown RBP7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 TTC7BQ86TV6 843 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 CAMK1DQ8IU85 385 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 KRTAP19-1Q8IUB9 90 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 TMEM139Q8IV31 216 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 LSMEM2Q8N112 164 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 PGBD5Q8N414 524 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 PQLC3Q8N755 202 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 OR4C6Q8NH72 309 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 MAPK15Q8TD08 544 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 EXTL1Q92935 676 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 PRR11Q96HE9 360 aaPredicted RBP7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 APOLD1Q96LR9 279 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 CCDC114Q96M63 670 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 DEPDC7Q96QD5 511 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 PANX2Q96RD6 677 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 CALN1Q9BXU9 219 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 HDAC8Q9BY41 377 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 DPH1Q9BZG8 443 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 FZD3Q9NPG1 666 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 THSD1Q9NS62 852 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLAMF8Q9P0V8 285 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 UBA2Q9UBT2 640 aaPredicted RBP7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 INTUQ9ULD6 942 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 ITM2BQ9Y287 266 aa7.03□□□□□ -1.28
TRIM53CP-201ENST00000531490 FADS3Q9Y5Q0 445 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms