RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ZHX1-C8orf76Q96EF9 292 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 PDXPQ96GD0 296 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 OR2A14Q96R47 310 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 C1QTNF1Q9BXJ1 281 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 UGT2B28Q9BY64 529 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ACE2Q9BYF1 805 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 DEFB129Q9H1M3 183 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 EHD3Q9NZN3 535 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 PGAP2Q9UHJ9 254 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 TBX20Q9UMR3 447 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 PCDHA9Q9Y5H5 950 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF541Q9H0D2 1346 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 MEIOCA2RUB1 952 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 TYW5A2RUC4 315 aaKnown RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 MEN1O00255 615 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 SOCS7O14512 581 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 UBDO15205 165 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 C1QBP02746 253 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 FTH1P02794 183 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 CYP2A6P11509 494 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 IL12RB1P42701 662 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ACOT2P49753 483 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 LIMK1P53667 647 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 DNAJB13P59910 316 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 CLCA4Q14CN2 919 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 AGKQ53H12 422 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 DALRD3Q5D0E6 543 aaKnown RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 SPANXN3Q5MJ09 141 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF782Q6ZMW2 699 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 EID3Q8N140 333 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 KLHL6Q8WZ60 621 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 CCDC120Q96HB5 630 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 PDLIM5Q96HC4 596 aaKnown RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 TNIP3Q96KP6 325 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 DMRTB1Q96MA1 342 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 SECISBP2Q96T21 854 aaKnown RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 GTPBP2Q9BX10 602 aaKnown RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 DCSTAMPQ9H295 470 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 SMOC2Q9H3U7 446 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 POLMQ9NP87 494 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 UCKL1Q9NWZ5 548 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 BTBD3Q9Y2F9 522 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF175Q9Y473 711 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 DAGLAQ9Y4D2 1042 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 HSPE1-MOB4S4R3N1 261 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 SCN9AQ15858 1988 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 A0A096LPK6 155 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 EEF2KO00418 725 aaKnown RBP8.08□□□□□ -1.12
CSDE1-214ENST00000530886 SLC16A6O15403 523 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 TULP3O75386 442 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 HMGN1P05114 100 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 COL6A1P12109 1028 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 GTF2E2P29084 291 aaKnown RBP8.08□□□□□ -1.12
CSDE1-214ENST00000530886 HOXA13P31271 388 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-214ENST00000530886 ATP5OP48047 213 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 MAPK12P53778 367 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 MEP1AQ16819 746 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 CYP51A1Q16850 503 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 SMTNL2Q2TAL5 461 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 NPNTQ6UXI9 565 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 PRSS42Q7Z5A4 293 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 IFNL1Q8IU54 200 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 BRSK2Q8IWQ3 736 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 GMCL1P1Q8NEA9 526 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 ZNF555Q8NEP9 628 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 AGR3Q8TD06 166 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 DEDD2Q8WXF8 326 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 ARNTL2Q8WYA1 636 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 BSNDQ8WZ55 320 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 CIDECQ96AQ7 238 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-214ENST00000530886 AKT1S1Q96B36 256 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 PEBP4Q96S96 227 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 CNPY3Q9BT09 278 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 TRIM54Q9BYV2 358 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 NUAK2Q9H093 628 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 TMEM168Q9H0V1 697 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 PPA2Q9H2U2 334 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 TOR3AQ9H497 397 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 PDLIM7Q9NR12 457 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 CMTM6Q9NX76 183 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 MAP10Q9P2G4 905 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 SLC17A6Q9P2U8 582 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 STYXL1Q9Y6J8 313 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 WDR27A2RRH5 827 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 EFCAB9A8MZ26 197 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 FXYD1O00168 92 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 MAP3K6O95382 1288 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 HOXD4P09016 255 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-214ENST00000530886 CBLP22681 906 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 CHMP24386 653 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 FMO4P31512 558 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 SLC15A1P46059 708 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 NPTX2P47972 431 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 LIG4P49917 911 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 SLC35A2P78381 396 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 TFAMQ00059 246 aaKnown RBP8.08□□□□□ -1.12
CSDE1-214ENST00000530886 BCL7AQ4VC05 210 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 ZBTB41Q5SVQ8 909 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 TMEM270Q6UE05 265 aa8.08□□□□□ -1.12
CSDE1-214ENST00000530886 BRINP3Q76B58 766 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms