RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ABCD2Q9UBJ2 740 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 PCTPQ9UKL6 214 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 ASB1Q9Y576 335 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 AK5Q9Y6K8 562 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 NCF1BA6NI72 391 aaPredicted RBP17.45■□□□□ 0.38
USH1C-205ENST00000527020 SYCE1LA8MT33 242 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 NCF1CA8MVU1 366 aaPredicted RBP17.45■□□□□ 0.38
USH1C-205ENST00000527020 PITPNM1O00562 1244 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 GPR39O43194 453 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 C1RP00736 705 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 HGFP14210 728 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 NCF1P14598 390 aaPredicted RBP17.45■□□□□ 0.38
USH1C-205ENST00000527020 CD9P21926 228 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 MZF1P28698 734 aaPredicted RBP17.45■□□□□ 0.38
USH1C-205ENST00000527020 C6orf52Q5T4I8 152 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 PCYOX1LQ8NBM8 494 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 EEF1AKMT1Q8WVE0 214 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 AFF4Q9UHB7 1163 aaKnown RBP17.45■□□□□ 0.38
USH1C-205ENST00000527020 CNOT11Q9UKZ1 510 aaKnown RBP17.45■□□□□ 0.38
USH1C-205ENST00000527020 GPR45Q9Y5Y3 372 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 COL4A6Q14031 1691 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 VPS26AO75436 327 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 ABLIM3O94929 683 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 PRAMEF12O95522 483 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 PYGLP06737 847 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 SLC7A1P30825 629 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 TTPAP49638 278 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 PLD1Q13393 1074 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 HMBOX1Q6NT76 420 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 HERC6Q8IVU3 1022 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 EID2BQ96D98 161 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 UHRF1Q96T88 793 aaPredicted RBP17.44■□□□□ 0.38
USH1C-205ENST00000527020 ADGRE3Q9BY15 652 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 SEMA6AQ9H2E6 1030 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 IL1RL2Q9HB29 575 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 HACD3Q9P035 362 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 FNDC3AQ9Y2H6 1198 aaKnown RBP17.44■□□□□ 0.38
USH1C-205ENST00000527020 NDUFAF1Q9Y375 327 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 SCN8AQ9UQD0 1980 aa17.44■□□□□ 0.38
USH1C-205ENST00000527020 H7C0S8 307 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 SCAMP3O14828 347 aaKnown RBP17.43■□□□□ 0.38
USH1C-205ENST00000527020 CSPG5O95196 566 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 CHRM3P20309 590 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 ATP6V1B2P21281 511 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 DIO3P55073 304 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 ZRANB3Q5FWF4 1079 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 THEMIS2Q5TEJ8 643 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 OGFOD2Q6N063 350 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 RIN3Q8TB24 985 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 FAM110BQ8TC76 370 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 ESAMQ96AP7 390 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 LINGO1Q96FE5 620 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 ZFRQ96KR1 1074 aaKnown RBP17.43■□□□□ 0.38
USH1C-205ENST00000527020 SLC2A11Q9BYW1 496 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 Q9H521 79 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 TRMT6Q9UJA5 497 aaKnown RBP17.43■□□□□ 0.38
USH1C-205ENST00000527020 VPS9D1Q9Y2B5 631 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 EME2A4GXA9 379 aaPredicted RBP17.43■□□□□ 0.38
USH1C-205ENST00000527020 STX7O15400 261 aaKnown RBP17.43■□□□□ 0.38
USH1C-205ENST00000527020 FZD6O60353 706 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 ZFP36L2P47974 494 aaKnown RBP17.43■□□□□ 0.38
USH1C-205ENST00000527020 ALDH7A1P49419 539 aaKnown RBP17.43■□□□□ 0.38
USH1C-205ENST00000527020 CLCN4P51793 760 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 MYBPC1Q00872 1141 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 XKR7Q5GH72 579 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 ISLR2Q6UXK2 745 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 SLC15A3Q8IY34 581 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 CPNE9Q8IYJ1 553 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 MINDY1Q8N5J2 469 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 SPDYE1Q8NFV5 336 aaPredicted RBP17.43■□□□□ 0.38
USH1C-205ENST00000527020 ZNF461Q8TAF7 563 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 IGSF21Q96ID5 467 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 CNBD2Q96M20 576 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 PLEKHG4BQ96PX9 1271 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 CENPKQ9BS16 269 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 SPATA16Q9BXB7 569 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 SMPD4Q9NXE4 827 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 STOML2Q9UJZ1 356 aa17.43■□□□□ 0.38
USH1C-205ENST00000527020 CNOT6Q9ULM6 557 aaKnown RBP17.43■□□□□ 0.38
USH1C-205ENST00000527020 C7orf72A4D263 438 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 ESRRBO95718 433 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 PABPC4LP0CB38 370 aaKnown RBP17.42■□□□□ 0.38
USH1C-205ENST00000527020 CNPY1Q3B7I2 92 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 NAIF1Q69YI7 327 aaPredicted RBP17.42■□□□□ 0.38
USH1C-205ENST00000527020 BLOC1S3Q6QNY0 202 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 TMEM150AQ86TG1 271 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 DHFR2Q86XF0 187 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 CCDC97Q96F63 343 aaPredicted RBP17.42■□□□□ 0.38
USH1C-205ENST00000527020 TEX37Q96LM6 180 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 HOPXQ9BPY8 73 aaPredicted RBP17.42■□□□□ 0.38
USH1C-205ENST00000527020 P2RY12Q9H244 342 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 COQ10BQ9H8M1 238 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 PAPOLBQ9NRJ5 636 aaKnown RBP17.42■□□□□ 0.38
USH1C-205ENST00000527020 CREBZFQ9NS37 354 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 CMTM6Q9NX76 183 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 YIPF1Q9Y548 306 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 OR51B4Q9Y5P0 310 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 ASPDHA6ND91 283 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 IQCF5A8MTL0 148 aa17.42■□□□□ 0.38
USH1C-205ENST00000527020 E2F3O00716 465 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms