RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 TP53TG5Q9Y2B4 290 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 MTORP42345 2549 aa6.42□□□□□ -1.38
VPS13B-211ENST00000522802 ANKRD36A6QL64 1941 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 VPS37CA5D8V6 355 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-211ENST00000522802 LMO7DNF2Z398 122 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 K7ERQ8 282 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 XPO1O14980 1071 aaKnown RBP6.41□□□□□ -1.38
VPS13B-211ENST00000522802 MCF2LO15068 1137 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 SPTLC2O15270 562 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 YY2O15391 372 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 DUX1O43812 170 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 KLHL18O94889 574 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 PRKAR1AP10644 381 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 CCL4P13236 92 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 TSHRP16473 764 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 ZNF18P17022 549 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 RABIFP47224 123 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 DAOAP59103 153 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 IL13RA1P78552 427 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 ALDH6A1Q02252 535 aaKnown RBP6.41□□□□□ -1.38
VPS13B-211ENST00000522802 PPP3CAQ08209 521 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 C16orf72Q14CZ0 275 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 DLG2Q15700 870 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 LACTB2Q53H82 288 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-211ENST00000522802 ATP1A1-AS1Q5TC04 95 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 KANK2Q63ZY3 851 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 ARHGAP17Q68EM7 881 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 NEK5Q6P3R8 708 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 TRMT10BQ6PF06 316 aaKnown RBP6.41□□□□□ -1.38
VPS13B-211ENST00000522802 ZNF761Q86XN6 746 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-211ENST00000522802 SFTPA2Q8IWL1 248 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 ZZZ3Q8IYH5 903 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 CCAR2Q8N163 923 aaKnown RBP6.41□□□□□ -1.38
VPS13B-211ENST00000522802 SIX6OS1Q8N1H7 587 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 ANKRD52Q8NB46 1076 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 ADAMTS17Q8TE56 1095 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 ERCC4Q92889 916 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-211ENST00000522802 UBXN6Q9BZV1 441 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 OR10A5Q9H207 317 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 TNMDQ9H2S6 317 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 CYP3A43Q9HB55 503 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 LRRC4Q9HBW1 653 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 LUC7LQ9NQ29 371 aaKnown RBP6.41□□□□□ -1.38
VPS13B-211ENST00000522802 CISHQ9NSE2 258 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 ABCC13Q9NSE7 274 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 SPASTQ9UBP0 616 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 TSPAN16Q9UKR8 245 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 NAALADL1Q9UQQ1 740 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 ITM2BQ9Y287 266 aa6.41□□□□□ -1.38
VPS13B-211ENST00000522802 SRPRBQ9Y5M8 271 aaKnown RBP6.41□□□□□ -1.38
VPS13B-211ENST00000522802 TNRC6AQ8NDV7 1962 aaKnown RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 CHD5Q8TDI0 1954 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 STMND1H3BQB6 276 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 NKX2-8O15522 239 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 TRIM13O60858 407 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 PAK4O96013 591 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 PRLP01236 227 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 FYNP06241 537 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 ANXA6P08133 673 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 TACR2P21452 398 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 OAS2P29728 719 aaKnown RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 CHRNA3P32297 505 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 NNMTP40261 264 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 GCLMP48507 274 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 RGS7P49802 495 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 PFN3P60673 137 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 SNRPFP62306 86 aaKnown RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 CEBPZQ03701 1054 aaKnown RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 ZFP36L1Q07352 338 aaKnown RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 BST2Q10589 180 aaKnown RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 CDC20Q12834 499 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 KLRB1Q12918 225 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 TERF2Q15554 542 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 KNOP1Q1ED39 458 aaKnown RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 ATP13A4Q4VNC1 1196 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 FHL5Q5TD97 284 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 C1QL3Q5VWW1 255 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 KCTD16Q68DU8 428 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 FAM173BQ6P4H8 233 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 ERN2Q76MJ5 926 aaKnown RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 TAC4Q86UU9 113 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 CHSY1Q86X52 802 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 CCDC117Q8IWD4 279 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 UNC45BQ8IWX7 931 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 SH2D3CQ8N5H7 860 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 Q8N9G6 341 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 OR2A12Q8NGT7 310 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 UBA3Q8TBC4 463 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 CALML6Q8TD86 181 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 DQX1Q8TE96 717 aaKnown RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 SEMA4DQ92854 862 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 ALG14Q96F25 216 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 SLC39A13Q96H72 371 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 DDX50Q9BQ39 737 aaKnown RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 SPATA25Q9BR10 227 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 SLC17A9Q9BYT1 436 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 IMPG2Q9BZV3 1241 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 LRRN3Q9H3W5 708 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 MMRN2Q9H8L6 949 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 L2HGDHQ9H9P8 463 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms