RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ETNK1Q9HBU6 452 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 HACD3Q9P035 362 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 VPS18Q9P253 973 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 ZNHIT2Q9UHR6 403 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 FKBPLQ9UIM3 349 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 KCNK6Q9Y257 313 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 PCDHB1Q9Y5F3 818 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 RNF215Q9Y6U7 377 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 ASPMQ8IZT6 3477 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 CCDC78A2IDD5 438 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 CAPNS1P04632 268 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 GP1BAP07359 652 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 ACP5P13686 325 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 ZNF140P52738 457 aaPredicted RBP17.67■□□□□ 0.42
CLK4-211ENST00000522556 PDX1P52945 283 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 TMPRSS15P98073 1019 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 HLTFQ14527 1009 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLK4-211ENST00000522556 LONRF2Q1L5Z9 754 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 KIF26BQ2KJY2 2108 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 P3H1Q32P28 736 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 CDCP2Q5VXM1 449 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 OGFOD3Q6PK18 319 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 CHST15Q7LFX5 561 aaPredicted RBP17.67■□□□□ 0.42
CLK4-211ENST00000522556 TMPRSS12Q86WS5 348 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 NAGSQ8N159 534 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 PRELID2Q8N945 189 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 MDM1Q8TC05 714 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 COG1Q8WTW3 980 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 SCG3Q8WXD2 468 aaKnown RBP17.67■□□□□ 0.42
CLK4-211ENST00000522556 SRPK1Q96SB4 655 aaKnown RBP17.67■□□□□ 0.42
CLK4-211ENST00000522556 CDH19Q9H159 772 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 SYNDIG1Q9H7V2 258 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 WDFY3Q8IZQ1 3526 aa17.67■□□□□ 0.42
CLK4-211ENST00000522556 GLYATL1P3A0A0U1RQE8 302 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 A0A1W2PQM1 296 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 STX7O15400 261 aaKnown RBP17.66■□□□□ 0.42
CLK4-211ENST00000522556 LDB2O43679 373 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 NUAK1O60285 661 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 ECEL1O95672 775 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 AP2A1O95782 977 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 MT-CO3P00414 261 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 JUPP14923 745 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 RPL22P35268 128 aaKnown RBP17.66■□□□□ 0.42
CLK4-211ENST00000522556 TAF1AQ15573 450 aaPredicted RBP17.66■□□□□ 0.42
CLK4-211ENST00000522556 CCNG2Q16589 344 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 C14orf28Q4W4Y0 310 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 PHYKPLQ8IUZ5 450 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 ZNF547Q8IVP9 402 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 SDR16C5Q8N3Y7 309 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 DCBLD1Q8N8Z6 715 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 ZDHHC1Q8WTX9 485 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 VPS35Q96QK1 796 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 ARNT2Q9HBZ2 717 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 RAD18Q9NS91 495 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.66■□□□□ 0.42
CLK4-211ENST00000522556 SLC23A2Q9UGH3 650 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 CLCA2Q9UQC9 943 aa17.66■□□□□ 0.42
CLK4-211ENST00000522556 TRBV23OR9-2A0A075B6M9 112 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 PMS2P1A4D2B8 440 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 TRABD2BA6NFA1 517 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 GRID2O43424 1007 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 PRSS56P0CW18 603 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 LPOP22079 712 aaPredicted RBP17.65■□□□□ 0.42
CLK4-211ENST00000522556 RPIAP49247 311 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 CCL7P80098 99 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 XIAPP98170 497 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 E2F1Q01094 437 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 POU6F1Q14863 301 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 CERCAMQ5T4B2 595 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 TTC27Q6P3X3 843 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 C17orf82Q86X59 251 aaPredicted RBP17.65■□□□□ 0.42
CLK4-211ENST00000522556 Q8N9G6 341 aaPredicted RBP17.65■□□□□ 0.42
CLK4-211ENST00000522556 OR52K1Q8NGK4 314 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 UBE2Q2Q8WVN8 375 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 NAT6Q93015 286 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 DNAJC1Q96KC8 554 aaKnown RBP17.65■□□□□ 0.42
CLK4-211ENST00000522556 FRMD8P1Q9BZ68 369 aaPredicted RBP17.65■□□□□ 0.42
CLK4-211ENST00000522556 LRRC40Q9H9A6 602 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 TRIM39Q9HCM9 518 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 TBC1D29Q9UFV1 150 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 PKP3Q9Y446 797 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 JRKLQ9Y4A0 524 aa17.65■□□□□ 0.42
CLK4-211ENST00000522556 A0A1W2PNU3 283 aaPredicted RBP17.64■□□□□ 0.41
CLK4-211ENST00000522556 TAF4O00268 1085 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 CHUKO15111 745 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 ZNF185O15231 689 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 CSO75390 466 aaKnown RBP17.64■□□□□ 0.41
CLK4-211ENST00000522556 PRAMEF1O95521 474 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 PROS1P07225 676 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 STIP1P31948 543 aaKnown RBP17.64■□□□□ 0.41
CLK4-211ENST00000522556 CTSCP53634 463 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 PEX6Q13608 980 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 SEPT6Q14141 434 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 ST3GAL2Q16842 350 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 CCDC38Q502W7 563 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 GPRC6AQ5T6X5 926 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 PDPK2PQ6A1A2 396 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 B3GNT8Q7Z7M8 397 aa17.64■□□□□ 0.41
CLK4-211ENST00000522556 ZNF761Q86XN6 746 aaPredicted RBP17.64■□□□□ 0.41
CLK4-211ENST00000522556 RASGEF1CQ8N431 466 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms