RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CD68P34810 354 aaPredicted RBP20.49■□□□□ 0.87
SDCBP-209ENST00000522243 RHDQ02161 417 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 ZNF569Q5MCW4 686 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 KIAA1614Q5VZ46 1190 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 CCDC70Q6NSX1 233 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 INO80CQ6PI98 192 aaPredicted RBP20.49■□□□□ 0.87
SDCBP-209ENST00000522243 BZW1Q7L1Q6 419 aaKnown RBP20.49■□□□□ 0.87
SDCBP-209ENST00000522243 CCDC50Q8IVM0 306 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 SFRP1Q8N474 314 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 CCNL2Q96S94 520 aaPredicted RBP20.49■□□□□ 0.87
SDCBP-209ENST00000522243 SLC38A3Q99624 504 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 ZMYND15Q9H091 742 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 OR2AG1Q9H205 316 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 RMI1Q9H9A7 625 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 AKAP7Q9P0M2 348 aaPredicted RBP20.49■□□□□ 0.87
SDCBP-209ENST00000522243 SPO11Q9Y5K1 396 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 IGSF10Q6WRI0 2623 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 C9orf172C9J069 976 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 TK2O00142 265 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 NUAK1O60285 661 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 ZRANB2O95218 330 aaKnown RBP eCLIP20.48■□□□□ 0.87
SDCBP-209ENST00000522243 LCA5LO95447 670 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 NFKB1P19838 968 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 FASLGP48023 281 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 LIMK2P53671 638 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 WASHC5Q12768 1159 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 NOMO1Q15155 1222 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 SPA17Q15506 151 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 SLC14A2Q15849 920 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 TFDP3Q5H9I0 405 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 P3H4Q92791 437 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 AHCYL2Q96HN2 611 aaKnown RBP20.48■□□□□ 0.87
SDCBP-209ENST00000522243 CARD9Q9H257 536 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 BPIFA1Q9NP55 256 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 KLHL8Q9P2G9 620 aaPredicted RBP20.48■□□□□ 0.87
SDCBP-209ENST00000522243 ACSL6Q9UKU0 697 aa20.48■□□□□ 0.87
SDCBP-209ENST00000522243 hCG_1818297A0A087WSY0 165 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 ERVH48-1M5A8F1 160 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 EFSO43281 561 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 MTX2O75431 263 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 LIPCP11150 499 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 BPIP17213 487 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 HHEXQ03014 270 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 NFATC2Q13469 925 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 CLPPQ16740 277 aaPredicted RBP20.47■□□□□ 0.87
SDCBP-209ENST00000522243 IYDQ6PHW0 289 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 CRTC3Q6UUV7 619 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 KATNAL2Q8IYT4 538 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 RCOR2Q8IZ40 523 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 TRAM1L1Q8N609 369 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 LSM14AQ8ND56 463 aaKnown RBP20.47■□□□□ 0.87
SDCBP-209ENST00000522243 OR4D9Q8NGE8 314 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 SNRNP27Q8WVK2 155 aaKnown RBP20.47■□□□□ 0.87
SDCBP-209ENST00000522243 KRT35Q92764 455 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 TRIM39Q9HCM9 518 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 RAD18Q9NS91 495 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 FAM153AQ9UHL3 310 aa20.47■□□□□ 0.87
SDCBP-209ENST00000522243 CYLC1P35663 651 aaPredicted RBP20.46■□□□□ 0.87
SDCBP-209ENST00000522243 WNT3AP56704 352 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 DCDC1P59894 354 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 C19orf57Q0VDD7 668 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 PLA2G4EQ3MJ16 856 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.46■□□□□ 0.87
SDCBP-209ENST00000522243 TMEM71Q6P5X7 295 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 KDELC1Q6UW63 502 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 PID1Q7Z2X4 250 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 ADGRG6Q86SQ4 1221 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 CCDC170Q8IYT3 715 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 ZNF567Q8N184 647 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 SLC25A41Q8N5S1 370 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 TTC9Q92623 222 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 GLYATL1Q969I3 302 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 PMEPA1Q969W9 287 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 ZSCAN5AQ9BUG6 496 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 HEMGNQ9BXL5 484 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 OSGEPL1Q9H4B0 414 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 PRDM8Q9NQV8 689 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 KLC4Q9NSK0 619 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 ADGRG1Q9Y653 693 aa20.46■□□□□ 0.87
SDCBP-209ENST00000522243 LOC400499M0QZD8 3231 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 SOWAHDA6NJG2 315 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 A8MU76 341 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 HGSO14964 777 aaPredicted RBP20.45■□□□□ 0.86
SDCBP-209ENST00000522243 THRAP10827 490 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 FGF3P11487 239 aaPredicted RBP20.45■□□□□ 0.86
SDCBP-209ENST00000522243 F3P13726 295 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 CHRNA4P43681 627 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 MAPK9P45984 424 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 GPLD1P80108 840 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 SQSTM1Q13501 440 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 SNAP47Q5SQN1 464 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 TMEM164Q5U3C3 297 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 DAAM2Q86T65 1068 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 VASH2Q86V25 355 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 OR10G6Q8NH81 332 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 JPH3Q8WXH2 748 aaPredicted RBP20.45■□□□□ 0.86
SDCBP-209ENST00000522243 HERPUD2Q9BSE4 406 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 C10orf88Q9H8K7 445 aa20.45■□□□□ 0.86
SDCBP-209ENST00000522243 SARS2Q9NP81 518 aaKnown RBP20.45■□□□□ 0.86
SDCBP-209ENST00000522243 NFKBIL1Q9UBC1 381 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 244.8 ms