RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 RBM20Q5T481 1227 aaKnown RBP21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 RAET1GQ6H3X3 334 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 NEK5Q6P3R8 708 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 TIFABQ6ZNK6 161 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 HORMAD1Q86X24 394 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 C4orf33Q8N1A6 199 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 SMC6Q96SB8 1091 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 TPSD1Q9BZJ3 242 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 CCDC68Q9H2F9 335 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 SGK2Q9HBY8 427 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 KCTD5Q9NXV2 234 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 ZDHHC3Q9NYG2 299 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 SENP1Q9P0U3 644 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 TMPRSS11EQ9UL52 423 aa21.2■□□□□ 0.98
R3HCC1-208ENST00000522012 LRRC72A6NJI9 287 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 PAK4O96013 591 aaPredicted RBP21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 ALDOAP04075 364 aaKnown RBP21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 PYGBP11216 843 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 CREB1P16220 341 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 ZNF7P17097 686 aaPredicted RBP21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 TYK2P29597 1187 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 MAT2AP31153 395 aaKnown RBP21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 GPR1P46091 355 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 CXCL12P48061 93 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 PXNP49023 591 aaPredicted RBP21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 SERPINB8P50452 374 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 SLC12A2P55011 1212 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 DPTQ07507 201 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 GPRC6AQ5T6X5 926 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 HECTD2Q5U5R9 776 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 ZNF549Q6P9A3 640 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 RBFAQ8N0V3 343 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 OR2T34Q8NGX1 318 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 COPS8Q99627 209 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 BOCQ9BWV1 1114 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 C1QTNF2Q9BXJ5 285 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 SNX15Q9NRS6 342 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 SMOXQ9NWM0 555 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 RAPGEFL1Q9UHV5 662 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 CORO1CQ9ULV4 474 aaPredicted RBP21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 NCOR1O75376 2440 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 K7ESM1 405 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 INPP4BO15327 924 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 PI15O43692 258 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 PCCBP05166 539 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 POLD2P49005 469 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 PPP2CBP62714 309 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 PPP2CAP67775 309 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 POU4F1Q01851 419 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 FGL2Q14314 439 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 LRRC14Q15048 493 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 WSCD2Q2TBF2 565 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 TMEM259Q4ZIN3 620 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 CWF19L1Q69YN2 538 aaKnown RBP21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 CMC1Q7Z7K0 106 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 NLRP8Q86W28 1048 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 PELI3Q8N2H9 469 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 BTN2A2Q8WVV5 523 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 CCDC97Q96F63 343 aaPredicted RBP21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 SLC17A9Q9BYT1 436 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 CLPBQ9H078 707 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 VWA7Q9Y334 891 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 ACTL7BQ9Y614 415 aa21.19■□□□□ 0.98
R3HCC1-208ENST00000522012 PRMT5O14744 637 aaPredicted RBP21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 ZNF217O75362 1048 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 SEMA4FO95754 770 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 IGLV3-19P01714 112 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 BRAFP15056 766 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 OXTRP30559 389 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 AKT1P31749 480 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 TAS2R39P59534 338 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 ITIH4Q14624 930 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 AGERQ15109 404 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 FAM45BPQ6NSW5 357 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 RAPH1Q70E73 1250 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 PLA2G15Q8NCC3 412 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 FAM45AQ8TCE6 357 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 GLYATL1Q969I3 302 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 DCUN1D1Q96GG9 259 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 BIRC8Q96P09 236 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 VPS35Q96QK1 796 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 AARSD1Q9BTE6 412 aaKnown RBP21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 IER2Q9BTL4 223 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 C1QTNF7Q9BXJ2 289 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 KCNK9Q9NPC2 374 aa21.18■□□□□ 0.98
R3HCC1-208ENST00000522012 SPAG7O75391 227 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 SLC25A14O95258 325 aaPredicted RBP21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 SOD1P00441 154 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 PKMP14618 531 aaKnown RBP21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 STMN1P16949 149 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 MAGEA9P43362 315 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 PGGT1BP53609 377 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 PPARDQ03181 441 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 MAP7D1Q3KQU3 841 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 PPM1JQ5JR12 505 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 PTRHD1Q6GMV3 140 aaKnown RBP21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 PNCKQ6P2M8 343 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 KRT222Q8N1A0 295 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 CAMKK1Q8N5S9 505 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 NAT14Q8WUY8 206 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms