RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 PRAMEF12O95522 483 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 IGLV3-27P01718 113 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 HSPA8P11142 646 aaKnown RBP11.28□□□□□ -0.6
CLK4-206ENST00000520878 HOXB8P17481 243 aaPredicted RBP11.28□□□□□ -0.6
CLK4-206ENST00000520878 KCNK10P57789 538 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 RAB33AQ14088 237 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 OR6Y1Q8NGX8 325 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 DPF3Q92784 378 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 CCDC28BQ9BUN5 200 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 TRIM8Q9BZR9 551 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 EGFL7Q9UHF1 273 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 SLCO3A1Q9UIG8 710 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 SLC8A2Q9UPR5 921 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 AKAP10O43572 662 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 TLL1O43897 1013 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 MTX2O75431 263 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 LBPP18428 481 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 ATP6V1C1P21283 382 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 CES1P23141 567 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 CD70P32970 193 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 GCKP35557 465 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 GDF5P43026 501 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 SLC7A2P52569 658 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 SNRPD1P62314 119 aaKnown RBP11.28□□□□□ -0.6
CLK4-206ENST00000520878 SH3BP2P78314 561 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 MED21Q13503 144 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 RFTN1Q14699 578 aaPredicted RBP11.28□□□□□ -0.6
CLK4-206ENST00000520878 MPPE1Q53F39 396 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 DHDDSQ86SQ9 333 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 OR56A4Q8NGH8 313 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 ACTRT2Q8TDY3 377 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 UCMAQ8WVF2 138 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 TNFRSF12AQ9NP84 129 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 DTNAQ9Y4J8 743 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 A0A0J9YYE9 177 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 PEX2P28328 305 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 HSPA7P48741 367 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 FOXA1P55317 472 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 ATP6V0D1P61421 351 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 LMAN2Q12907 356 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 RARS2Q5T160 578 aaKnown RBP11.27□□□□□ -0.6
CLK4-206ENST00000520878 CHST9Q7L1S5 443 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 MIER2Q8N344 545 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 C17orf80Q9BSJ5 609 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 BOCQ9BWV1 1114 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 SPATA16Q9BXB7 569 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 NOL11Q9H8H0 719 aaKnown RBP11.27□□□□□ -0.6
CLK4-206ENST00000520878 CLEC4EQ9ULY5 219 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 NDUFAF1Q9Y375 327 aa11.27□□□□□ -0.6
CLK4-206ENST00000520878 CCDC189A1A4V9 331 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 NRP2O60462 931 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 CDK14O94921 469 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 SYN1P17600 705 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 PBLDP30039 288 aaPredicted RBP11.27□□□□□ -0.61
CLK4-206ENST00000520878 CCNG1P51959 295 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 DDX39BQ13838 428 aaKnown RBP11.27□□□□□ -0.61
CLK4-206ENST00000520878 NFYCQ13952 458 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 SQLEQ14534 574 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 ARHGAP15Q53QZ3 475 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 CXorf57Q6NSI4 855 aaKnown RBP11.27□□□□□ -0.61
CLK4-206ENST00000520878 DNAJC14Q6Y2X3 702 aaPredicted RBP11.27□□□□□ -0.61
CLK4-206ENST00000520878 NRG4Q8WWG1 115 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 SLC30A3Q99726 388 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 TRMOQ9BU70 441 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 SLC25A23Q9BV35 468 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 EMILIN2Q9BXX0 1053 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 KLHL4Q9C0H6 718 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 ZBTB26Q9HCK0 441 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 INTS10Q9NVR2 710 aaKnown RBP11.27□□□□□ -0.61
CLK4-206ENST00000520878 RALGAPA2Q2PPJ7 1873 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 GLYATL1P3A0A0U1RQE8 302 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 DNAJA2O60884 412 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 HIST1H2AGP0C0S8 130 aaPredicted RBP11.27□□□□□ -0.61
CLK4-206ENST00000520878 ACADSP16219 412 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 HIST1H2ADP20671 130 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 FDXRP22570 491 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 CTSOP43234 321 aaPredicted RBP11.27□□□□□ -0.61
CLK4-206ENST00000520878 NTHL1P78549 312 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 CHRNA6Q15825 494 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 C18orf21Q32NC0 220 aaPredicted RBP11.27□□□□□ -0.61
CLK4-206ENST00000520878 GAREM2Q75VX8 874 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 MILR1Q7Z6M3 343 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 JADE3Q92613 823 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 HIST1H2AHQ96KK5 128 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 HIST1H2AJQ99878 128 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 H2AFJQ9BTM1 129 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 C1orf21Q9H246 121 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 LRCH1Q9Y2L9 728 aa11.27□□□□□ -0.61
CLK4-206ENST00000520878 SLC2A4P14672 509 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 GNAZP19086 355 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 CPOXP36551 454 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 WDR5P61964 334 aaKnown RBP11.26□□□□□ -0.61
CLK4-206ENST00000520878 LCP2Q13094 533 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 Q6ZVU0 165 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 TSPAN33Q86UF1 283 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 SORCS1Q8WY21 1168 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 LPGAT1Q92604 370 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 VPS33AQ96AX1 596 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 CCDC97Q96F63 343 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms