RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SOD2P04179 222 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 ZNF37AP17032 561 aaPredicted RBP10.09□□□□□ -0.79
MCF2-209ENST00000520602 CTNNB1P35222 781 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 PPM1AP35813 382 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 AGTR2P50052 363 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 ESRRGP62508 458 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 FAM189BP81408 668 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 TRIM71Q2Q1W2 868 aaKnown RBP10.09□□□□□ -0.79
MCF2-209ENST00000520602 REP15Q6BDI9 236 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 MAVSQ7Z434 540 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 ENDOVQ8N8Q3 282 aaKnown RBP10.09□□□□□ -0.79
MCF2-209ENST00000520602 RNF38Q9H0F5 515 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 ING2Q9H160 280 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 SPATS2LQ9NUQ6 558 aaKnown RBP10.09□□□□□ -0.79
MCF2-209ENST00000520602 INTS10Q9NVR2 710 aaKnown RBP10.09□□□□□ -0.79
MCF2-209ENST00000520602 VPS51Q9UID3 782 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 INSL5Q9Y5Q6 135 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.09□□□□□ -0.79
MCF2-209ENST00000520602 H3BMM5 538 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 CLDN7O95471 211 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 CACNG1Q06432 222 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 CDC16Q13042 620 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 RFTN1Q14699 578 aaPredicted RBP10.09□□□□□ -0.79
MCF2-209ENST00000520602 ZNF284Q2VY69 593 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 MPPE1Q53F39 396 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 CLEC4FQ8N1N0 589 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 KDM1BQ8NB78 822 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 VPS33AQ96AX1 596 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 COPS8Q99627 209 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 TBCDQ9BTW9 1192 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 DPY30Q9C005 99 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 PARVBQ9HBI1 364 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 ZBTB26Q9HCK0 441 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 ZNF711Q9Y462 761 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 TNPO3Q9Y5L0 923 aaKnown RBP10.09□□□□□ -0.79
MCF2-209ENST00000520602 PLXNB2O15031 1838 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 GPR39O43194 453 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 DNAJA2O60884 412 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 GLUD1P00367 558 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 HSPA1AP0DMV8 641 aaKnown RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 HSPA1BP0DMV9 641 aaKnown RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 CSF2RAP15509 400 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 ZNF23P17027 643 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 RPL38P63173 70 aaKnown RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 CREB5Q02930 508 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 ILF2Q12905 390 aaKnown RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 PGS1Q32NB8 556 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 AASDHQ4L235 1098 aaPredicted RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 OTUD3Q5T2D3 398 aaPredicted RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 PSAPL1Q6NUJ1 521 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 ISCA2Q86U28 154 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 TMEM199Q8N511 208 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 ST13P5Q8NFI4 369 aaPredicted RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 GORASP1Q9BQQ3 440 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 FEM1AQ9BSK4 669 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 EBF3Q9H4W6 596 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 TFB2MQ9H5Q4 396 aaKnown RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 IGSF5Q9NSI5 407 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 CIDEBQ9UHD4 219 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 CORO1CQ9ULV4 474 aaPredicted RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 WDR81Q562E7 1941 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 DPPA5A6NC42 116 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 WASH4PA8MWX3 477 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 E7ENX8 843 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 PGM3O95394 542 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 CAPN1P07384 714 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 OR56A5P0C7T3 313 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 ARSAP15289 507 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 PSMC3P17980 439 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 NELFEP18615 380 aaKnown RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 POLR2EP19388 210 aaKnown RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 ARNTP27540 789 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 ARRB2P32121 409 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 PTGER3P43115 390 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 VEGFBP49765 207 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 AQP4P55087 323 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 FOLH1Q04609 750 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 ZNF678Q5SXM1 525 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 MANEALQ5VSG8 457 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 KREMEN2Q8NCW0 462 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 MED8Q96G25 268 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 FOPNLQ96NB1 174 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 IPPKQ9H8X2 491 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 VCX3AQ9NNX9 186 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 LRRC42Q9Y546 428 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 PRR23AA6NEV1 266 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 PPP6CO00743 305 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 ZNF197O14709 1029 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 VPS4BO75351 444 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 ULK1O75385 1050 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 TIPRLO75663 272 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 PARNO95453 639 aaKnown RBP10.08□□□□□ -0.8
MCF2-209ENST00000520602 ESR1P03372 595 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 KLKB1P03952 638 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 IDO1P14902 403 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 EPB42P16452 691 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 VCLP18206 1134 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 MSH3P20585 1137 aa10.08□□□□□ -0.8
MCF2-209ENST00000520602 ADSLP30566 484 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms