RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PCDH12Q9NPG4 1184 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 LHX9Q9NQ69 397 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 PIGVQ9NUD9 493 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 SIDT1Q9NXL6 827 aaKnown RBP4.86□□□□□ -1.63
SDCBP-207ENST00000520168 MPP6Q9NZW5 540 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 TMEM9Q9P0T7 183 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 COPG2Q9UBF2 871 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 ZNF212Q9UDV6 495 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 B3GNT3Q9Y2A9 372 aa4.86□□□□□ -1.63
SDCBP-207ENST00000520168 MAP1AP78559 2803 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 A8MU76 341 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 P4HA2O15460 535 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 LRRTM2O43300 516 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 KDELR3O43731 214 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ZNF500O60304 480 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 RAMP2O60895 175 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 SRGAP2O75044 1071 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 RECQL5O94762 991 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 IPO13O94829 963 aaKnown RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 KIAA0754O94854 1291 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 TMCC1O94876 653 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 F13A1P00488 732 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ALPPP05187 535 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 CEACAM5P06731 702 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 PYGLP06737 847 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 IVLP07476 585 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 FGF5P12034 268 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 BPIP17213 487 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 TEAD1P28347 426 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 PTPN4P29074 926 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 SERPINA4P29622 427 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 GNA15P30679 374 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 GKP32189 559 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ADCY8P40145 1251 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ACTR1BP42025 376 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 CCL11P51671 97 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ACTR1AP61163 376 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 RHOAP61586 193 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 UBE2HP62256 183 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 PDE1BQ01064 536 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 SLC6A3Q01959 620 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 HHEXQ03014 270 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 DNM1Q05193 864 aaKnown RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 CDK18Q07002 472 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 FOXM1Q08050 763 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ZNF235Q14590 738 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 PCSK7Q16549 785 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 LRRC73Q5JTD7 316 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 SNAP47Q5SQN1 464 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 VWA5B1Q5TIE3 1220 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 RESP18Q5W5W9 173 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ANKRD40Q6AI12 368 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 PNCKQ6P2M8 343 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 MED25Q71SY5 747 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 BTLAQ7Z6A9 289 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 TMEM135Q86UB9 458 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 PPP1R3BQ86XI6 285 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 NRROSQ86YC3 692 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 SFRP1Q8N474 314 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 GLIS1Q8NBF1 620 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 PLA2G15Q8NCC3 412 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ZNF606Q8WXB4 792 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 NCSTNQ92542 709 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 NT5C3BQ969T7 300 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 VOPP1Q96AW1 172 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 PAGE5Q96GU1 130 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 SCYL1Q96KG9 808 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 TUBGCP5Q96RT8 1024 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 NPY6RQ99463 290 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 TEX101Q9BY14 249 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 FRMD8Q9BZ67 464 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 SCAND2PQ9GZW5 306 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ILKAPQ9H0C8 392 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 GRPEL1Q9HAV7 217 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ASF1BQ9NVP2 202 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 TMEM248Q9NWD8 314 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 DNAJB12Q9NXW2 375 aaKnown RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 GPR83Q9NYM4 423 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ARMCX3Q9UH62 379 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ZNHIT2Q9UHR6 403 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 LNPEPQ9UIQ6 1025 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ITGB1BP2Q9UKP3 347 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 SUFUQ9UMX1 484 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 CNTN6Q9UQ52 1028 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 MTMR6Q9Y217 621 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 ATP8A1Q9Y2Q0 1164 aa4.85□□□□□ -1.63
SDCBP-207ENST00000520168 COPG1Q9Y678 874 aaKnown RBP4.85□□□□□ -1.63
SDCBP-207ENST00000520168 SPG11Q96JI7 2443 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 PKDREJQ9NTG1 2253 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 PIKFYVEQ9Y2I7 2098 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 A0A1W2PQ67 120 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 BICDL2A1A5D9 508 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 FAM221AA4D161 298 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 GOLGA6CA6NDK9 693 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 GOLGA6BA6NDN3 693 aa4.84□□□□□ -1.63
SDCBP-207ENST00000520168 LILRA5A6NI73 299 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms