RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 LRIF1Q5T3J3 769 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 EEF1A1P5Q5VTE0 462 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 NADSYN1Q6IA69 706 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 FAM109BQ6ICB4 259 aaPredicted RBP3.01□□□□□ -1.93
SKP1-203ENST00000517625 KIAA0930Q6ICG6 404 aaPredicted RBP3.01□□□□□ -1.93
SKP1-203ENST00000517625 GAGE2AQ6NT46 116 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 RGMBQ6NW40 437 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 WDR73Q6P4I2 378 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 SDCCAG8Q86SQ7 713 aaPredicted RBP3.01□□□□□ -1.93
SKP1-203ENST00000517625 PRPF39Q86UA1 669 aaKnown RBP3.01□□□□□ -1.93
SKP1-203ENST00000517625 GPR180Q86V85 440 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 PGBD5Q8N414 524 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 GCSAMQ8N6F7 178 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 C9orf106Q8NAJ2 232 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 SLC38A9Q8NBW4 561 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 HJURPQ8NCD3 748 aaPredicted RBP3.01□□□□□ -1.93
SKP1-203ENST00000517625 TMED6Q8WW62 240 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 TANKQ92844 425 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 NEUROG1Q92886 237 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 SAT2Q96F10 170 aaPredicted RBP3.01□□□□□ -1.93
SKP1-203ENST00000517625 SCMH1Q96GD3 660 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 ADGRG7Q96K78 797 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 C6orf106Q9H6K1 298 aaPredicted RBP3.01□□□□□ -1.93
SKP1-203ENST00000517625 FKRPQ9H9S5 495 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 EBF2Q9HAK2 575 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 NOX4Q9NPH5 578 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 MARCH4Q9P2E8 410 aaPredicted RBP3.01□□□□□ -1.93
SKP1-203ENST00000517625 MORF4L1Q9UBU8 362 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 GAGE2DQ9UEU5 116 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 DBNLQ9UJU6 430 aaKnown RBP3.01□□□□□ -1.93
SKP1-203ENST00000517625 FBXL2Q9UKC9 423 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 R3HDM2Q9Y2K5 976 aaKnown RBP3.01□□□□□ -1.93
SKP1-203ENST00000517625 PCDHAC2Q9Y5I4 1007 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 SNX9Q9Y5X1 595 aa3.01□□□□□ -1.93
SKP1-203ENST00000517625 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.01□□□□□ -1.93
SKP1-203ENST00000517625 PTPRCP08575 1304 aa3□□□□□ -1.93
SKP1-203ENST00000517625 A0A1W2PQ09 198 aa3□□□□□ -1.93
SKP1-203ENST00000517625 TMEM8BA6NDV4 472 aa3□□□□□ -1.93
SKP1-203ENST00000517625 GLOD5A6NK44 160 aa3□□□□□ -1.93
SKP1-203ENST00000517625 MID1O15344 667 aa3□□□□□ -1.93
SKP1-203ENST00000517625 SLC16A5O15375 505 aa3□□□□□ -1.93
SKP1-203ENST00000517625 DDNO94850 711 aaPredicted RBP3□□□□□ -1.93
SKP1-203ENST00000517625 CLDN14O95500 239 aa3□□□□□ -1.93
SKP1-203ENST00000517625 PMS2P2O95744 297 aa3□□□□□ -1.93
SKP1-203ENST00000517625 NR2F1P10589 423 aa3□□□□□ -1.93
SKP1-203ENST00000517625 FGF3P11487 239 aaPredicted RBP3□□□□□ -1.93
SKP1-203ENST00000517625 ZNF23P17027 643 aa3□□□□□ -1.93
SKP1-203ENST00000517625 S1PR1P21453 382 aa3□□□□□ -1.93
SKP1-203ENST00000517625 ITGB8P26012 769 aa3□□□□□ -1.93
SKP1-203ENST00000517625 TMPOP42166 694 aaKnown RBP3□□□□□ -1.93
SKP1-203ENST00000517625 LMAN1P49257 510 aa3□□□□□ -1.93
SKP1-203ENST00000517625 CTSCP53634 463 aa3□□□□□ -1.93
SKP1-203ENST00000517625 PDE1BQ01064 536 aa3□□□□□ -1.93
SKP1-203ENST00000517625 CXCL9Q07325 125 aa3□□□□□ -1.93
SKP1-203ENST00000517625 DDR1Q08345 913 aa3□□□□□ -1.93
SKP1-203ENST00000517625 SYT16Q17RD7 645 aa3□□□□□ -1.93
SKP1-203ENST00000517625 C18orf63Q68DL7 685 aa3□□□□□ -1.93
SKP1-203ENST00000517625 RHBDF2Q6PJF5 856 aa3□□□□□ -1.93
SKP1-203ENST00000517625 KRT74Q7RTS7 529 aa3□□□□□ -1.93
SKP1-203ENST00000517625 RBM23Q86U06 439 aaKnown RBP3□□□□□ -1.93
SKP1-203ENST00000517625 CCDC190Q86UF4 302 aa3□□□□□ -1.93
SKP1-203ENST00000517625 PM20D2Q8IYS1 436 aa3□□□□□ -1.93
SKP1-203ENST00000517625 RNF113BQ8IZP6 322 aaKnown RBP3□□□□□ -1.93
SKP1-203ENST00000517625 C17orf53Q8N3J3 647 aaPredicted RBP3□□□□□ -1.93
SKP1-203ENST00000517625 POC5Q8NA72 575 aa3□□□□□ -1.93
SKP1-203ENST00000517625 OR2AK2Q8NG84 335 aa3□□□□□ -1.93
SKP1-203ENST00000517625 HM13Q8TCT9 377 aa3□□□□□ -1.93
SKP1-203ENST00000517625 PPP4R1Q8TF05 950 aa3□□□□□ -1.93
SKP1-203ENST00000517625 PRPF31Q8WWY3 499 aaKnown RBP3□□□□□ -1.93
SKP1-203ENST00000517625 ZKSCAN4Q969J2 545 aaPredicted RBP3□□□□□ -1.93
SKP1-203ENST00000517625 TMEM19Q96HH6 336 aa3□□□□□ -1.93
SKP1-203ENST00000517625 GRAMD2BQ96HH9 432 aa3□□□□□ -1.93
SKP1-203ENST00000517625 C3orf30Q96M34 536 aa3□□□□□ -1.93
SKP1-203ENST00000517625 CEP295NLQ96MC4 621 aa3□□□□□ -1.93
SKP1-203ENST00000517625 HRH4Q9H3N8 390 aa3□□□□□ -1.93
SKP1-203ENST00000517625 PIGMQ9H3S5 423 aa3□□□□□ -1.93
SKP1-203ENST00000517625 GAREM1Q9H706 876 aa3□□□□□ -1.93
SKP1-203ENST00000517625 SEBOXQ9HB31 216 aaPredicted RBP3□□□□□ -1.93
SKP1-203ENST00000517625 TMEM30AQ9NV96 361 aa3□□□□□ -1.93
SKP1-203ENST00000517625 DNAJB4Q9UDY4 337 aa3□□□□□ -1.93
SKP1-203ENST00000517625 CHORDC1Q9UHD1 332 aaPredicted RBP3□□□□□ -1.93
SKP1-203ENST00000517625 ARHGEF40Q8TER5 1519 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 TTC3P53804 2025 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 IGKV2D-30A0A075B6S6 120 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 A0A1W2PR77 199 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 LNP1A1A4G5 178 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 OR2A25A4D2G3 310 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 ANKRD66B4E2M5 251 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 CTDSP2O14595 271 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 ANKRD28O15084 1053 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 PAPSS1O43252 624 aaPredicted RBP2.99□□□□□ -1.93
SKP1-203ENST00000517625 KDM4BO94953 1096 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 STARD3NLO95772 234 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 TGFB3P10600 412 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 KCNA5P22460 613 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 GCH1P30793 250 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 CCKARP32238 428 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 NNMTP40261 264 aa2.99□□□□□ -1.93
SKP1-203ENST00000517625 EIF2DP41214 584 aaKnown RBP2.99□□□□□ -1.93
SKP1-203ENST00000517625 MMP14P50281 582 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms