RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 GPS1Q13098 491 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 MYLK3Q32MK0 819 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 DCAF10Q5QP82 559 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 SOGA3Q5TF21 947 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 MSANTD2Q6P1R3 559 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 NFRKBQ6P4R8 1299 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 PGM2L1Q6PCE3 622 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 SLC36A4Q6YBV0 504 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 HOGA1Q86XE5 327 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 LACC1Q8IV20 430 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 PHC2Q8IXK0 858 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 SYT14Q8NB59 555 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 PCYOX1LQ8NBM8 494 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 CLEC4CQ8WTT0 213 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 SNRNP27Q8WVK2 155 aaKnown RBP-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 TRIM43Q96BQ3 446 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 FNBP1Q96RU3 617 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 YME1L1Q96TA2 773 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 HDHD5Q9BXW7 423 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 XRN2Q9H0D6 950 aaKnown RBP eCLIP-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 ZNF331Q9NQX6 463 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 INTS9Q9NV88 658 aaKnown RBP-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 NDE1Q9NXR1 346 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 CLEC5AQ9NY25 188 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 FLRT3Q9NZU0 649 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 CLEC4EQ9ULY5 219 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 DNAJC16Q9Y2G8 782 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 IGLV4-60A0A075B6I1 120 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 A0A087WZ62 844 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 A0A1W2PN81 502 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 ANO9A1A5B4 782 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 K7ENM7 598 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 K7ESF4 209 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 APBB3O95704 486 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 SUPT20HL2P0C7V6 817 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 HOXB9P17482 250 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 DDIT3P35638 169 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 CHRNA7P36544 502 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 HNRNPH2P55795 449 aaKnown RBP-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 RPL15P61313 204 aaKnown RBP-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 RAB1AP62820 205 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 TLE3Q04726 772 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 PSG7Q13046 419 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 INAVAQ3KP66 663 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 CHRFAM7AQ494W8 412 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 TMEM35AQ53FP2 167 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 MARC1Q5VT66 337 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 GDPGP1Q6ZNW5 385 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 NAXDQ8IW45 347 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 C1orf162Q8NEQ5 155 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 NUP37Q8NFH4 326 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 OR5AP2Q8NGF4 316 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 SLC22A17Q8WUG5 538 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 SLC38A5Q8WUX1 472 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 SMARCD2Q92925 531 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 SLCO4A1Q96BD0 722 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 MCRS1Q96EZ8 462 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 CDK5RAP3Q96JB5 506 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 SEMA3CQ99985 751 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 C16orf70Q9BSU1 422 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 CHCHD5Q9BSY4 110 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 ISG20L2Q9H9L3 353 aaKnown RBP-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 THAP10Q9P2Z0 257 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 MARCOQ9UEW3 520 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 COPG1Q9Y678 874 aaKnown RBP-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 CAPN7Q9Y6W3 813 aa-1.04□□□□□ -2.58
RNU6-539P-201ENST00000516665 GOLGA6L9A6NEM1 432 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 C15orf61A6NNL5 157 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 NCAM2O15394 837 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 XPOTO43592 962 aaKnown RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 SH3BGRLO75368 114 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 PDE9AO76083 593 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ACTL6AO96019 429 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 CYP3A4P08684 503 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZNF286BP0CG31 522 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 TFPIP10646 304 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 HAPLN1P10915 354 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ODC1P11926 461 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZNF23P17027 643 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ITGAXP20702 1163 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 IBSPP21815 317 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 YWHAQP27348 245 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ATICP31939 592 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ELF1P32519 619 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 EIF2S3P41091 472 aaKnown RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 STX17P56962 302 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ADARB1P78563 741 aaKnown RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 CYCSP99999 105 aaKnown RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 CDONQ4KMG0 1287 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 TMEM268Q5VZI3 342 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 KIF6Q6ZMV9 814 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 FAM131BQ86XD5 332 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 GOLGA6L2Q8N9W4 650 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZNF383Q8NA42 475 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 SLC43A3Q8NBI5 491 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 Q8NDZ9 215 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZNF397Q8NF99 534 aaPredicted RBP-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 OR5R1Q8NH85 324 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 C2CD4CQ8TF44 421 aa-1.05□□□□□ -2.58
RNU6-539P-201ENST00000516665 HPSE2Q8WWQ2 592 aa-1.05□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms